Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0052 |
Symbol | |
ID | 4616355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 46476 |
End bp | 47822 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639783133 |
Product | hypothetical protein |
Protein accession | YP_929579 |
Protein GI | 119871572 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAAGG CGAGGATAAG AGGTATCTAT GCCACAGCAC TTACAAAACT CGCCCTTGAC TGGGGCTTTG AAATTGTACA ACCGACTCAA CAAATTATAA ACCGCTTTGG CCTAAAGCCA GACTACTCAC CGCCAGACAT CACAGTAAAA GACCACGAGT CAAAGACAGG AGTTGTGACA ATTGGGGAAT GCCAAGCCGT CGACTACTTT TTGGAGAGAC TTAGGCAATA TGTAGACCCG GTGATAGCTA AGGCGTCGGC TGGGTTGCAC GACGTTTTTA TAGGCCGCGT AGTTGGAGAG GGGCTTGTGG AGGCCCCTGG CGGCCAGCTT ATGGAAGTGC CAAGGCGCTA TGTAGTCCAG CCAGGTAGTA CGTCTGTCTT TACAGTTGTA AAACCTCCCA TGGGCCCCTT CCGGGGCGTC GCCGTTCCGG AGATAGTCGT CGAGGGGAAG CTTTTGGAGC TCAACACCAC GGGGAGGGTC TCCTACAGTA GACATATTGC AGAGCAGGAG AGACTCAGAC TGAGGATACT GGCCGAGACG AAGTTAAAAA ACTACGCCTC GATAGGCCTA CGTTTTAAAT CTTCGGCAAA ATACGCCAGT GAAGATGAGT TGGCCAAAGA GGCAGAGGAG CTTTACAAAG AGATGCTTAA GATATCGCAG GGAGGGCCCC CCGGCACCTT GTTGAGGAGA GGCAAATGCA TAGCCGTGGT GTTATTTGAC AGACAGGCGA AGTTTAAACT TGACGAGGCC AGGGCGGCAG TTGTGCCGAC GATACGGGGC CACCACGCAT TGAGAGGGCA GGGCCTTGGC AAATGTCTAG ATCTGCTAGA CTACGCAGGA GCTGACGTCT ATGAGAAAGC CGTAGAGTTC TTAGCCAGGG GAAGAGTCGT CATCTACCAC GTCAAGCCCT GGGGCGAGGT GATCAAAATG CGGGGGGAGG TGGTAAAAAT ATCTGACGAC GTCCTCGTGG TGAAGAGGCC GCTGAGACCC GGCGGCGTCC TCGACGGGAT CGGCGCTAAG ATCGAGCCGG GGACCTACGC CCTCACTTGT GTGCCGAAGT CCGGCGGGTA TGTGGTACAC AGTTACTACA GCGCCTCCGG CGTCTATCTG GGGACCTACG TGAACATAAA TACAGATCCC GAGTGGGGCC GCCGCATTAT ATACATAGAC CTCCTAGTGG ACAAGGCCTA TGGTCTCGAC GGCGTTGAGA GAGTACTAGA CGCTGACGAG CTCCAGCGCT ACGCCCACAT GCTCCCTGAG AGACTGAGGA GGCCCGAGGC CCCCGGCGGA AAAATATGTA CTTCCGAGGG ACTTACCTCA GCTCTTCCTC AGTCTTCCTC CGCTTAA
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Protein sequence | MFKARIRGIY ATALTKLALD WGFEIVQPTQ QIINRFGLKP DYSPPDITVK DHESKTGVVT IGECQAVDYF LERLRQYVDP VIAKASAGLH DVFIGRVVGE GLVEAPGGQL MEVPRRYVVQ PGSTSVFTVV KPPMGPFRGV AVPEIVVEGK LLELNTTGRV SYSRHIAEQE RLRLRILAET KLKNYASIGL RFKSSAKYAS EDELAKEAEE LYKEMLKISQ GGPPGTLLRR GKCIAVVLFD RQAKFKLDEA RAAVVPTIRG HHALRGQGLG KCLDLLDYAG ADVYEKAVEF LARGRVVIYH VKPWGEVIKM RGEVVKISDD VLVVKRPLRP GGVLDGIGAK IEPGTYALTC VPKSGGYVVH SYYSASGVYL GTYVNINTDP EWGRRIIYID LLVDKAYGLD GVERVLDADE LQRYAHMLPE RLRRPEAPGG KICTSEGLTS ALPQSSSA
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