| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0044 |
|---|
| Symbol | |
|---|
| ID | 4617312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 39940 |
|---|
| End bp | 40938 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639783125 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_929571 |
|---|
| Protein GI | 119871564 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.268461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAT GTGCCAGTGG TTTTTCTGGT ATGGATTCTC GGTTAGTGGA TGTGTTGATG
GAGGTTCAGT ATGACTTTCC TCTGGTGGAG CGGCCTTTTG CTGTGGTGGG TGAGAGGGTT
GGGCTTGGGG AGGGGGAGGT GGTTGAGGTT CTGCGGGGGG CTGTGAGGGC TGGGGTGCTT
AAGAGGATTG GGGCGATTTT GAACTACAGG GCGAGGGGGA TGGAGGCGGC TTTGGTGGGG
ATGGCTGTGC CGGAGGACGT CATCGAGGTG GTGGCGGCGG AGGTGAATAG GGACCCGTAC
GTGAGCCACA ACTTCCAGCG GGATTTCAAG CCGTACAACC TGTGGTTTGT GACTAAGGCG
CGTAGTAGGG AGGAGCTGGA GGGGAAGGTG GCGGCTGTGG CTGGGAGGTT CGGCCTGGAC
TACGTGATCC TCTACTCGCT TAGGTCCTAC AAGGTGGATG TGAGGTTTGA CTTGAGGAGG
GGGGTGTCGT GGACGAAGGG CGAGGTCATG CCGGAGTCGC CTCCCTCTGT GGAGTCGCTT
GGGGTGCCGC AGGCCTTCTT CTCCAGGGTG AAGTCTCTGC CGCTGGTGCC CGAGCCGTTT
AGGGAGGTGG CCGAGGCGCT GGGCACCTCC GTGGGGGAGG CGCTGGCGAA GATCAGGGAG
CTCATTAGGC TGGGGGTGCT CCGGGACCTC CACGGCACTC TGGACGGGGA GGCGGTTGGG
TTTAGGGAGA ACGCCATGGT GGTGGTTAGG GAGCCGGTCT GCGAGGCGGC GGCTAGGCTC
AACATCACCA CCCACGTGGT TTTGAGAAAC ACGGTGCCGG GGAAGTGGGA GTATCCCTGC
TACTTTATGG TCCACGGCGT GTCTAGACAA GTGCTTGAGG ACTATATTAG AGACGCGGTT
AGGAAACTGG GCGTCTCTGA CTACCGCGTT TTATATAGTG TGCGGGGTTT TTTGAGTGGG
CGGGAGATGG GGAGGAGGGT GGAACAAGTG GCGGACTAG
|
|---|
| Protein sequence | MFLCASGFSG MDSRLVDVLM EVQYDFPLVE RPFAVVGERV GLGEGEVVEV LRGAVRAGVL
KRIGAILNYR ARGMEAALVG MAVPEDVIEV VAAEVNRDPY VSHNFQRDFK PYNLWFVTKA
RSREELEGKV AAVAGRFGLD YVILYSLRSY KVDVRFDLRR GVSWTKGEVM PESPPSVESL
GVPQAFFSRV KSLPLVPEPF REVAEALGTS VGEALAKIRE LIRLGVLRDL HGTLDGEAVG
FRENAMVVVR EPVCEAAARL NITTHVVLRN TVPGKWEYPC YFMVHGVSRQ VLEDYIRDAV
RKLGVSDYRV LYSVRGFLSG REMGRRVEQV AD
|
|---|
| |