Gene Pisl_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0040 
Symbol 
ID4618053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp35901 
End bp36635 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID639783121 
Producthypothetical protein 
Protein accessionYP_929567 
Protein GI119871560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.488133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTGTT TCTGTGGGAG GCCTGCAAGA GAGAGCGGCT TTTGTCCATA CCACGACCCC 
AACTGTGTTA AAGACCTGGC TTGCCGGCGG AAGTTAGTTT TTACAGCCGA CTGCGAGAGG
TGCCACCTGC CGGGGGGCGA GGTGTCAGAT GTCGCGCCTA GGCTGAGGGA GGCTAGAGTC
CACGGCCCGC TCTTTATATA CTATGTAACT GGCGACGTAG ACCTCCGTGG GGCTGGGGGC
ATAGATCTTT TTATCTACAG CGTGAGGGGG AATATATATC TCGAGGGGGC TAGATTCCGC
CATATATACA TAGACCAAGT CGTCGGCGAT GTAGATTTTA GAGGGGGGAG AGCTGAGCTC
TTCGCCGTGT TTTCAGTACG TGGCGAAATC TCGGCGGCCG GCGCAAAAAT TGGGGGCCAT
CTACAAGTGG TAGAGTCCTC GGGGCGTCTT GATTTAACTG GGGCGGGGGT GGTCGGCGAA
ATTATTGTCG AGAGGTTCAG AGGGGGTGTT GTAGCTAGGG CGGGGGCCTA CTCTATAACA
ATATGTGGGT CTAGGGGAGA TGTAGATCTG TCGGGGGCGC GTACTACTGG AGATATAGTG
CTTGTAGAGT CGGAGGGAGG CCGTCTCGAT TTGTCTGGAG TAGAAGTGGG CGGCAGGGTG
TTTATCTTGG CCTCTAAGTT TGGCGGAGTT AGAATCGACC GGCCTGAGGT AGTGAGGAAA
ATTGTCGTGT TGTAG
 
Protein sequence
MRCFCGRPAR ESGFCPYHDP NCVKDLACRR KLVFTADCER CHLPGGEVSD VAPRLREARV 
HGPLFIYYVT GDVDLRGAGG IDLFIYSVRG NIYLEGARFR HIYIDQVVGD VDFRGGRAEL
FAVFSVRGEI SAAGAKIGGH LQVVESSGRL DLTGAGVVGE IIVERFRGGV VARAGAYSIT
ICGSRGDVDL SGARTTGDIV LVESEGGRLD LSGVEVGGRV FILASKFGGV RIDRPEVVRK
IVVL