Gene Pisl_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0028 
Symbol 
ID4617693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp25003 
End bp26415 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content54% 
IMG OID639783109 
Producthypothetical protein 
Protein accessionYP_929555 
Protein GI119871548 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGGC TGGCGGCGTC GCTATTACTC CTGGCTTTAT CTGTCTCCTC CGCCACGGTG 
TTGACTAGAG CAGACCAACT CTCTATTGAC GCGGCGTATC CAATACTACG GAAGTATATA
CCAGACATTA GGATAATCCC CGCAGACCCC ACCCAATGGA GGGGGCTCAT AGAGAGGGGA
GACGTAGACT TCCTCTGGGC CGGCGCGCCG GTGCTTTACG AAGCCCTCCT GCGGGAGGGC
TACCTAGCCC CCATGCCAGA TGTCCCAGAG CTTAGACAAA TGCCAGAGAG GGCGGGGGGT
ATTTTACTCA AGCGGATGGG GCCAGATGGG AAGACGTACT ACGTGGTCTA CGGTCTCTTA
GGCTATGTAA TTGGCTATAG CAACGAGGCC CTCGCCAAGG CGGGAGTTCA GCTTGCGTGT
AGCTGGGCGG CCCTCGCCTC GCCGAATCTC ACTAAATACT ACCTACAGAC AGGCGCTAAG
CCCGTCGTCC TCGCGCGGCC TACCAAGTCC ACCTCCACAG CCGCGATGAT GCAACTGGTG
ACAGAGATAT ACGGCTGGGA GGAGGGCTGG AGACTCCTCA CCGCCATGGC GGCTCACTCT
AGATTTGTTG ACTCAAGTGG CGCAGTGCGA GACGTCGTAA AGAGAGGCGA GGCTCTCTTC
GGCCCCATGG TTGACTACTA CGTCTTTATC GCAGGGCTTG ACTACTGTAT TCCGGCAGAC
GGCACAGACA TACTCTTTGA CCCCATCGCC GTGCCTCGGG GCGCCAATGC CACAGCAGCG
GCTTTATTAA CCAGAGTCTT CCTCACCGAG TTAGAGAAGA GACTTATAGA TAGGTATATA
CTGCCCGGCA ATCTAGCTCT GTTAGACTCC CCAGACGTAA ACCAGACTAA AGCCGCAGTT
TTAAAACGCC ATTTAGACAA GCTCATGAAG GCAAAGGTAT TGGCAGTGCC GCCTGAAAAA
AGCGCGTCGT ATTACTACTC CTTTATCTAC TACTACGAGG CCACTCTAGT AGATCTCCAA
GACCAGCTCA CCTCCGTCTG GGCGAAGCTA GTAGACGCCT ACTACTCCGG CAGAATATCT
AGACAACAGT TTGAAAGACT GTGGCGCCTC TTGGGAGCGC CAGTGAACTA CACAGACCCC
GCCACAGGCC AGACTAGGGC CTTTACATAT CAAGACGCCG TCGCAATAAA CGACAAAATA
GCGGGAGACC CCACCTATAG AGATAGACTT GTCCAGGCAT GGAGAGAGGC CGCCAGGGCG
AAATATCAGA GAGTAGAGGC CGAGTTAGAA AAGCTACTTA CGCAGACTCA AGCCACGCCG
CCTGAACAGT CTATAGCAAT TACAACACTG GCGGCGGCCG TTGTAGTTAT ACTAGCCGTA
GCGCTCTTTT TAATAAAGAG GAGAAGAACT TAA
 
Protein sequence
MWRLAASLLL LALSVSSATV LTRADQLSID AAYPILRKYI PDIRIIPADP TQWRGLIERG 
DVDFLWAGAP VLYEALLREG YLAPMPDVPE LRQMPERAGG ILLKRMGPDG KTYYVVYGLL
GYVIGYSNEA LAKAGVQLAC SWAALASPNL TKYYLQTGAK PVVLARPTKS TSTAAMMQLV
TEIYGWEEGW RLLTAMAAHS RFVDSSGAVR DVVKRGEALF GPMVDYYVFI AGLDYCIPAD
GTDILFDPIA VPRGANATAA ALLTRVFLTE LEKRLIDRYI LPGNLALLDS PDVNQTKAAV
LKRHLDKLMK AKVLAVPPEK SASYYYSFIY YYEATLVDLQ DQLTSVWAKL VDAYYSGRIS
RQQFERLWRL LGAPVNYTDP ATGQTRAFTY QDAVAINDKI AGDPTYRDRL VQAWREAARA
KYQRVEAELE KLLTQTQATP PEQSIAITTL AAAVVVILAV ALFLIKRRRT