| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0024 |
|---|
| Symbol | |
|---|
| ID | 4618095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 20507 |
|---|
| End bp | 22588 |
|---|
| Gene Length | 2082 bp |
|---|
| Protein Length | 693 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639783105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_929551 |
|---|
| Protein GI | 119871544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA GGGTTTTCCT GGCCGCCGCC CTAGCTCTCA TCGCCTATGG CCAGACGACG
GTGGCAAGCC CCACGGTAGA CTACCTCTGG CTCGGCGCTA GGTGGACGCA ATTGCCCAAA
TTCCCAGGTG ACGTAGGCGT GTTGAGCCTC TCTTTCTACC TCTCGGCACA GTACGTCGAC
GTTTCTGTCT CTCTGACGCC CCGGTGCCCC TACCTCGCCC CGCTTGAGAC AGTCTCTCTG
CCGTCGGCAG GGCCTGGCGT AGTCACTATA GCGCTCCGGG CCTCGGCCTC GGCCCTCAAC
GTGACGTGCC CCGTAAACGT GGCGATACGC GCCACATATA AGACAGTCGG CTCAAGTCTC
ACCACCGGCA TAGAGAAGCT GGAATACGCC GAGGTTTACA TACCGCCCTA TCCAACGGCT
AATGTGACAG CCGCAGGAGT TACATACTTA GGTCTCCCCA GCCAGATTAA CCTAACTATC
TCCAGTCCCT ACGCCCTTGT GGGTGTTTTG ACCATACAAG GACAGGGCGC CAGGGTTGTA
TCCCCAACGG GCCCTGTGGC TATCAGCGGC AGACAGGCGG TCGTGTCTGT AGTCGTCGCG
GCCGACAGCC CCAGCGCCTC TCTACAAGCG ACAATCCAGA CGAGAGACTG GCTGGGGAAC
CCTGTGGTTT TAGCCTACGC TGTGCCGTTG TCCGTCACGC CTCCCCCACC GCCCCTCCTC
TATATAACCC CAACCGTACT CTATGCAAAT AGGTATAACC GCGTGAATCT CACAGTCGTC
TTGCCAACGC CTGCCGACGG CCAAGCAGTT ATAACGGCGT CGGGGGCGGT TATGCCTCAG
TCAAGTGTGT CGATTCCCAT CAGAGGCGGT CGCGGCTCCG CGTCGCTAGA CGTCTACCCC
GTCTCCTCCG TCGTCACTTT CACGGCACAG GTGATGTACC AAATCGCCGG CGTGTCGAAG
ATAGACCAAG TGTTGGCCTC CGCCGCCGTA CAACAGCCGG CGGGCGGCGC CTCTAGGCTT
GACGTAAGGC CGACCCGCCT AATCGCGGGC GTTGCCAACA ACGTAACTCT CTACGTCTCG
GCGCCGGGGC CCTTTAACGC CACGGTATCT ATGTCTAACG CCGCCGTAGA CAAGCCCATG
CCATATACCT TCGGCGGAGT GGACAAGGCG GCTGCTAACC TCGTCGTGAT GCCCCTCTCC
AACCAGCCCG TCGTCATCGC CGTCATAATC TACCACAGAC AGGGCACAGA CCAGTATATG
GTAAGTCTCC CTGTTCCCTC GTCTTCCATA TTTACAGTAG TGCCGAGCCC CTCTCTCGTC
AAATCCGGCG GCAATAGGAC AGTTGTCGTT ACAATTATCA ACAGTGGAGA CGTAGTAGTA
CAGAAGGCAG TGGTGACAAT ATCGCCAGCG ACGTCAGCCC TCCTGGCGCC GACCTACACC
TTCCAGATAG GCAGACTTGC CCCCCTGGAA AGCGCCCAGC TACCCATCTC TTTTATAGTG
CCCGCCACCT ACAGTGGCGC AATAGCCTTT ACCTACAACA TTATATACAC CACCGAGCTG
GGGACCGCAG GCACGGCGCA GGGAAACTTC TACCTCCAAG CCCTCCAGAC GCCTGTTGTC
AACATCACAA GCATATCTGT CGTCCCCCAG ATAGTAGAGC CGAGGAGGAC CTTCTATATC
TCTATCACTG TAGTCAACAA GGGCTTCGCC CCAGTTACAA ACCTCCAGGT AGAGGCGAAA
CCGCCGCGTG GCATTAGGCC GATAACTGCG CCGATATATT TCGCGGGACA GCTAGACCCG
CAACAGACCG CCACCATACC CCTCAGCTTT AACGCCACGG CGCCCGGCAA TTACGACATA
CAGCTCTTGC TGAGCTACAC AGATCAATAC GGCAATCTCT ACACTATGCC ATATATAGTG
ACGGTATCTG TGACAAACTC TACGAAACGG CCACCCCCAA CTCGCGAGTC TCTACAACAA
GAGACAGCCG CGCCGCCGGC CGCCTACGTT ATTGCAATAG CAACAGCTGT AGCAACTGCA
GGCGGGTATC TATATATCAA GAGGAGGAAA GCCTCTGGAT GA
|
|---|
| Protein sequence | MDKRVFLAAA LALIAYGQTT VASPTVDYLW LGARWTQLPK FPGDVGVLSL SFYLSAQYVD
VSVSLTPRCP YLAPLETVSL PSAGPGVVTI ALRASASALN VTCPVNVAIR ATYKTVGSSL
TTGIEKLEYA EVYIPPYPTA NVTAAGVTYL GLPSQINLTI SSPYALVGVL TIQGQGARVV
SPTGPVAISG RQAVVSVVVA ADSPSASLQA TIQTRDWLGN PVVLAYAVPL SVTPPPPPLL
YITPTVLYAN RYNRVNLTVV LPTPADGQAV ITASGAVMPQ SSVSIPIRGG RGSASLDVYP
VSSVVTFTAQ VMYQIAGVSK IDQVLASAAV QQPAGGASRL DVRPTRLIAG VANNVTLYVS
APGPFNATVS MSNAAVDKPM PYTFGGVDKA AANLVVMPLS NQPVVIAVII YHRQGTDQYM
VSLPVPSSSI FTVVPSPSLV KSGGNRTVVV TIINSGDVVV QKAVVTISPA TSALLAPTYT
FQIGRLAPLE SAQLPISFIV PATYSGAIAF TYNIIYTTEL GTAGTAQGNF YLQALQTPVV
NITSISVVPQ IVEPRRTFYI SITVVNKGFA PVTNLQVEAK PPRGIRPITA PIYFAGQLDP
QQTATIPLSF NATAPGNYDI QLLLSYTDQY GNLYTMPYIV TVSVTNSTKR PPPTRESLQQ
ETAAPPAAYV IAIATAVATA GGYLYIKRRK ASG
|
|---|
| |