Gene Pisl_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0022 
Symbol 
ID4617935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp19059 
End bp20141 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content58% 
IMG OID639783103 
Productradical SAM domain-containing protein 
Protein accessionYP_929549 
Protein GI119871542 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATACT CTTGGCCGGA GGTTGTCTAT AAAGTCGACG AGAGTCTCCT CCGCCTGCCC 
AACGTGAGGC CCTCTCCCTA CTTTGAGACT GCCGGCGGGG CTGTCGTATG TAAGCTCTGC
CACCGCCGCT GTAGGCTGAG AGACGGCGCC ATGGGGGCCT GCGGCATGAG ATTTAGTCTC
GGGGGCAGGC TCTACACAGC GGCATATGGC TTACTGACGG CGGCTGAATC TAGGCCCATG
GAGATAAAGC CTCTCTACCA CTTCTACCCC GGCACTTCGG CCATGACCAT AAGCACGTGG
GGCTGTAACT TCCCCTGCGC CTGGTGTCAA AACTGGCATA TAAGCAAAGT GGCGTCTCCC
GTGGGCCGCT ACGTCCAACC AGAGGAGGTA GTTAAGTGGG CTGTGGAAAA CGGAGACTCT
GGCGTAAACA TAAGCTTCAA CGAGCCCACC CTTCTGGCGG AATACGCAGA GGATTTGTTC
AAGCTGGCGA GGGCCGCTGG GCTACATACC TCTATAAATA CCAATGGCTA CCTCACTGAG
GAAGTTCTGG CGCGACTAGC CTCTGCCGGC ATGGAGGGCA TGAACATAGA CATAAAGGGG
GGCAGGCAGA CGTATAAAAG GTGGCTCGGG GCGGATTTAG ACAAGATGCT CTCCACGGCC
AGAGCGGCAA AGAGACTCGG CATCTACATA GAATTCACGT ACTTGGTGAT CCCGGGGGTA
AACGACGACG AGGCAGACGA AGTAGTAAAC GCCGTGGCCT CTTTCGGCCG AGAAACCCCG
CTACATATCA CGGCCTACCA CCCGGCGCAC AGGCTCTACA ACCCGCCCAC CCCGCCCGAC
CTTCTCGAAT CTATATGGCG CAGGGCGAGG AGAGAGCTAG ACTACGTATA CGTGGGCAAC
GTACCTGGGC ACCCGGGGCA ACACACCTAC TGCCCCAAGT GCGGATACCC CGTCGTCAAG
AGATACGGCG ACAGAGCTGT AAGAATAGAG CTAAGAGAGG GGAGGTGCCC CAGATGTGGC
CACGAAATCC CCGTCAGAGG TAGGCCAGGC CGCTATGGCA ACCTCTACCG CGCCTATCTC
TAG
 
Protein sequence
MIYSWPEVVY KVDESLLRLP NVRPSPYFET AGGAVVCKLC HRRCRLRDGA MGACGMRFSL 
GGRLYTAAYG LLTAAESRPM EIKPLYHFYP GTSAMTISTW GCNFPCAWCQ NWHISKVASP
VGRYVQPEEV VKWAVENGDS GVNISFNEPT LLAEYAEDLF KLARAAGLHT SINTNGYLTE
EVLARLASAG MEGMNIDIKG GRQTYKRWLG ADLDKMLSTA RAAKRLGIYI EFTYLVIPGV
NDDEADEVVN AVASFGRETP LHITAYHPAH RLYNPPTPPD LLESIWRRAR RELDYVYVGN
VPGHPGQHTY CPKCGYPVVK RYGDRAVRIE LREGRCPRCG HEIPVRGRPG RYGNLYRAYL