Gene Pisl_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0021 
Symbol 
ID4618109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp18145 
End bp19062 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID639783102 
Producthypothetical protein 
Protein accessionYP_929548 
Protein GI119871541 
COG category[R] General function prediction only 
COG ID[COG2248] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CCCCGGTGGG GGAGGAGTCC CTCGGGGTTA GGTCGATGTG TTTCTATGTC 
GAGACTCGCG ACGTGAGGAT ACTCTTCGAC GCGGGGGTGT CCCTAGCGCC GAGGCGCTTC
GGGCTGCCGC CGCACCCCCG GGAGTTGGAG AGGGCCCGGG CGGTGAGGGC TGAGATACTG
CGGCTTGCAG AGGCCGCCGA CGTGGTCACT GTCAGCCATT ACCACCGAGA CCACTTCACC
CCCTGGTACC CCAGCGTTTA TATGGCTACA GACGGCGAAA TGTACAAGAG AGTGTACAGG
GGGAAGAAGG TCCTCATGAA GAGCCCCCAA GACCTGAACT GGTCCCAGAG GAGGAGACAC
TACGGTCTCT CCAAGGCCCT CCAGGAGACG GGGGCGGAGG CGGTTTACGC AGACGGCGGC
GAGTGGACCT TCGGGGAGAC GAGGGTCGCC GCCTCCCCGC CCCTCTGGCA CGGCCCCGCC
GGGTCGAAGA CGGGGCGTGT CGTCGGCTTT GCCGTCAGCG ACGGCGAGGA GAGGCTTGTG
TTTCTCCCAG ACGTAGAGGG GCCTCTGGAG CCGGAGCCCA TCGCCTTCGC CAGAGAGGCG
AGGCCCACCG TGGTAGTCGT CGGGGGGCCG CCCACCTACC TCGGCTGGGA TCTCGAGAAG
GCGATTAAGA ACCTCGCCGA GCTAGTGGAG CTGAGACCCC ACACCCTAGT CCTCGCCCAC
CACCTCCTCC GGGATATGCA GTGGAGAGAG AAAGTGGCGC CTCTCTTTGA GCTGGCCGAG
AGGAGGGGGG TGGAGGTGGC CACCTACGCC AGTCTCGCCG GGAGGCCCGA GGAGCTTTTG
GAGGCCAGGA GGAGGGAGCT CTATGCCAAA GAGCCCGCCG CGGCTGTGGA GACGGGGGAG
GGGGAAGAGG AGGACTAG
 
Protein sequence
MDFSPVGEES LGVRSMCFYV ETRDVRILFD AGVSLAPRRF GLPPHPRELE RARAVRAEIL 
RLAEAADVVT VSHYHRDHFT PWYPSVYMAT DGEMYKRVYR GKKVLMKSPQ DLNWSQRRRH
YGLSKALQET GAEAVYADGG EWTFGETRVA ASPPLWHGPA GSKTGRVVGF AVSDGEERLV
FLPDVEGPLE PEPIAFAREA RPTVVVVGGP PTYLGWDLEK AIKNLAELVE LRPHTLVLAH
HLLRDMQWRE KVAPLFELAE RRGVEVATYA SLAGRPEELL EARRRELYAK EPAAAVETGE
GEEED