Gene Pisl_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0002 
Symbol 
ID4616623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1869 
End bp2660 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content52% 
IMG OID639783082 
Producthypothetical protein 
Protein accessionYP_929529 
Protein GI119871522 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.246824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTTTT GTTTTGTTGT GGCTGTTGTG GCTTTGTTAA CGGATTTTGG GTTTAGGGAC 
TATTTTGTGG CTGTTATGAA GGGGGTTATA CTTTCTATAA ATCCTGGGGC GCGTATCGTC
GATATTACTC ACGAGGTGCC TCCGCAAGAT GTTTTTACCG GCGCTTTTAT CCTTAAGGCG
GCTTATAGGT GGTTTCCGCC TGGCACGATT TTTGTCGCTG TGGTAGACCC TGGGGTTGGC
ACTGAGAGAG CTCCCCTTAT TTTAAAGACG AGGAGGTATT TCTTCGTAGG TCCTGACAAC
GGCCTTTTGG CTCCTGCTGC TGAGGAAGAC GGCGTGTTAG AGGCGTATAG GATTGAGGTG
AGGCTTCCAC AGCTCTCGTC GACGTTTCAC GGCCGAGACG TTTTTGCGCC TGCGGCGGCC
TATCTGTCGC TTGGCGTAGA GCCGCGCCTC ATTGGGTCTC CTATTTCGCA GTGGAAGAGG
TTGGAGATTC CAGAGGCGCG TGTTGTAGAC GGCGTTGTGT ACAGCCGCGT TGTGTATATA
GATAGGTTTG GCAATGTATA TACATCTGCG AGAAGTCTCC AGGGCGTGTC GTATGGAGAG
GTTATGTGTG TAGAGACGCC TAGGGGCGTC CTCAGGGCTA GATATGTAGA GACCTATGGC
AGAGTTTCGC CGGGGGAGGC GGTCTTGCTT ATAAACAGCG AGGGGTATCT AGAGCTTGCG
GTCGCAATGG GAAACGCCGC CGCTACATAC GGCTTGAGGC CGGGAGATGA GATAAAAATC
TACAGGTGTT AA
 
Protein sequence
MGFCFVVAVV ALLTDFGFRD YFVAVMKGVI LSINPGARIV DITHEVPPQD VFTGAFILKA 
AYRWFPPGTI FVAVVDPGVG TERAPLILKT RRYFFVGPDN GLLAPAAEED GVLEAYRIEV
RLPQLSSTFH GRDVFAPAAA YLSLGVEPRL IGSPISQWKR LEIPEARVVD GVVYSRVVYI
DRFGNVYTSA RSLQGVSYGE VMCVETPRGV LRARYVETYG RVSPGEAVLL INSEGYLELA
VAMGNAAATY GLRPGDEIKI YRC