Gene Sama_R0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_R0050 
Symbol 
ID4603788 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1867547 
End bp1869083 
Gene Length1537 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID640721201 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.898769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC 
GGCAGCGGGA AGATAGCTTG CTATCTTTGC CGGCGAGCGG CGGACGGGTG AGTAATACCT
GGGGATCTGC CCAATCGAGG GGGATAACAG TTGGAAACGA CTGCTAATAC CGCATACGCC
CTACGGGGGA AAGGAGGGGC TCTTCGGACC TTCCGCGATT GGATGAACCC AGGCGGGATT
AGCTAGTAGG TGAGGTAATG GCTCACCTAG GCGACGATCC CTAGCTGTTC TGAGAGGATG
GACAGCCACA CTGGGACTGA GACACGGCCC AGACTCCTAC GGGAGGCAGC AGTGGGGAAT
ATTGGACAAT GGGGGAAACC CTGATCCAGC CATGCCGCGT GTGTGAAGAA GGCCTTCGGG
TTGTAAAGCA CTTTCAGTGG GGAGGAAAGG TTGTAGGTTA ATACCCTATA GCTGTGACGT
TACCCACAGA AGAAGCACCG GCTAACTCCG TGCCAGCAGC CGCGGTAATA CGGAGGGTGC
AAGCGTTAAT CGGAATTACT GGGCGTAAAG CGTGCGCAGG CGGTCTGTTA AGCGAGATGT
GAAAGCCCCG GGCTCAACCT GGGAACTGCA TTTCGAACTG GCAGACTAGA GTCTTGTAGA
GGGGGGTAGA ATTCCAGGTG TAGCGGTGAA ATGCGTAGAG ATCTGGAGGA ATACCGGTGG
CGAAGGCGGC CCCCTGGACA AAGACTGACG CTCAGGCACG AAAGCGTGGG GAGCAAACAG
GATTAGATAC CCTGGTAGTC CACGCCGTAA ACGATGTCTA CTCGGAGTTT GGTGTCTTGA
ACACTGGGCT CTCAAGCTAA CGCATTAAGT AGACCGCCTG GGGAGTACGG CCGCAAGGTT
AAAACTCAAA TGAATTGACG GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAT
GCAACGCGAA GAACCTTACC TACTCTTGAC ATCCAGAGAA TTCGCTAGAG ATAGCTTAGT
GCCTTCGGGA ACTCTGAGAC AGGTGCTGCA TGGCTGTCGT CAGCTCGTGT TGTGAAATGT
TGGGTTAAGT CCCGCAACGA GCGCAACCCT TATCCTTATT TGCCAGCGGG TAGTGCCGGG
AACTTTAGGG AGACTGCCGG TGATAAACCG GAGGAAGGTG GGGACGACGT CAAGTCATCA
TGGCCCTTAC GAGTAGGGCT ACACACGTGC TACAATGGCG AGTACAGAGG GTTGCGAAGC
CGCGAGGTGG AGCTAATCTC ATAAAGCTCG TCGTAGTCCG GATTGGAGTC TGCAACTCGA
CTCCATGAAG TCGGAATCGC TAGTAATCGT GGATCAGAAT GCCACGGTGA ATACGTTCCC
GGGCCTTGTA CACACCGCCC GTCACACCAT GGGAGTGGGC TGCACCAGAA GTAGATAGCT
TAACCTTCGG GAGGGCGTTT ACCACGGTGT GGTTCATGAC TGGGGTGAAG TCGTAACAAG
GTAGCCCTAG GGGAACCTGG GGCTGGATCA CCTCCTT
 
Protein sequence