| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_R0020 |
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| Symbol | |
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| ID | 4605921 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 284629 |
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| End bp | 287542 |
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| Gene Length | 2914 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640721172 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.879348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.651924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA
GTAACTTGCG AAAAGCGTTG GTGAGGTAGT AACAACCGTT ATAGCCAGCG ATGTCCGAAT
GGGGAAACCC GGCACCATAA GGTGTCATCA CTAAGTGAAT ACATAGCTTA GTGAGGCGAA
CGAGGGGAAC TGAAACATCT AAGTACCCTC AGGAAAAGAA ATCAACCGAG ATTCCCTCAG
TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCTTCGGG GTGTTAGTGG AATGGTCTGG
AAAGTCCAAC GGTACAGGGT GATAGTCCCG TACACGACAA CTAACCAAAG ATGAAATCGA
GTAAGGCGGC ACACGTGATA TGTTGTCTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT
ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG
AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA
CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CGTTTTGTAG CGAGGTTAAG
CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGCGTAGA
CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA
CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT
CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GGACGAACAC
CTTTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA
ACTCCGAATA CCAAAGAGTG CTATCCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC
AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TAATTGCTAA GTGGGAAACG
ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG
CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAGCAATTCA
CCGAAGCTAC GGGTGTGCAC GATAACGTGT ACGCGGTAGA GGAGCGTTCT GTAAGCCGTT
GAAGGTGAAG GGGTAACCCA CACTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC
GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC
GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACGGGT
TAATATTCCC GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCCAGCACGG
CGTTGGTTGT CCGTGTTTAA GGTGGTAGGT AGTGTGCTTA GGCAAATCCG GGCACACATA
TACCGAGAGC TGATGACGAG TCACTACGGT GACGAAGTGG TTGATGCCAT GCTTCCAGGA
AAATCTTCTA AGCTTCAGGT TAGCAGGAAT CGTACCCCAA ACCGACACAG GTGGTCGGGT
AGAGAATACC AAGGCGCTTG AGAGAACTCG GCTGAAGGAA CTAGGCAAAA TGGTACCGTA
ACTTCGGGAG AAGGTACGCT GCTGTTGGTG ACGGGACTTG CTCCCTGAGC TGACGGCAGT
CGCAGATACC AGGTGGCTGC AACTGTTTAT CAAAAACACA GCACTGTGCA AACTCGCAAG
AGGAAGTATA CGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATTG GGTTATCGCA
AGAGAAGCTC ATGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT
AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA TGGCCACGCT
GTCTCCAGCC GAGACTCAGT GAAGTTGAAA TTGCGGTGAA GATGCCGTAT ACCCGCGGCT
AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTGGCAC TGAACATTGA CCCTACATGT
GTAGGATAGG TGGGAGACTT TGAAGCGGGA ACGCCAGTTC TCGTGGAGTC AACCTTGAAA
TACCACCCTT GTAGTGTTGA TGTTCTAACC TCGGTCCATG AATCTGGACT AGGGACAGTG
CCTGGTGGGT AGTTTGACTG GGGCGGTCTC CTCCCAAAGA GTAACGGAGG AGCACGAAGG
TTGGCTAAAC ACGGTCGGAC ATCGTGTGGT TAGTGTAATG GCACAAGCCA GCTTAACTGC
GAGACAGACA CGTCGAGCAG GTACGAAAGT AGGTCATAGT GATCCGGTGG TTCTGCATGG
AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGATA ACAGGCTGAT ACCGCCCAAG
AGTTCATATC GACGGCGGTG TTTGGCACCT CGATGTCGGC TCATCACATC CTGGGGCTGA
AGTCGGTCCC AAGGGTATGG CTGTTCGCCA TTTAAAGTGG TACGCGAGCT GGGTTCAGAA
CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGCGTTG GAAGATTGAG GGGGGTTGCT
CCTAGTACGA GAGGACCGGA GTGAACGAAC CGCTGGTGTT CGGGTTGTCA TGCCAATGGC
ATTGCCCGGT AGCTACGTTC GGAATCGATA ACCGCTGAAA GCATCTAAGC GGGAAGCGAG
CCCCAAGATG AGTCTTCCCT TGGACCTTGA GTCCACTGAA GAGCCGTCCG AGACCAGGAC
GTTGATAGGC AGGGTGTGTA AGCGTTGTGA GGCGTTGAGC TAACCTGTAC TAATGACTCG
TGCGGCTTAA CCATACAACC CAGATGGGTT TCAG
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| Protein sequence | |
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