Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_R0015 |
Symbol | |
ID | 4605916 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 277686 |
End bp | 280599 |
Gene Length | 2914 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640721167 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.631469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.115726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA GTAACTTGCG AAAAGCGTTG GTGAGGTAGT AACAACCGTT ATAGCCAGCG ATGTCCGAAT GGGGAAACCC GGCAGCATAA GCTGTCATCA CTAAGTGAAT ACATAGCTTA GTGAGGCGAA CGAGGGGAAC TGAAACATCT AAGTACCCTC AGGAAAAGAA ATCAACCGAG ATTCCCTCAG TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCTTCGGG GTGTTAGTGG AATGGTCTGG AAAGTCCAAC GGTACAGGGT GATAGTCCCG TACACGACAA CTAACCAAAG ATGAAATCGA GTAAGGCGGC ACACGTGATA TGTTGTCTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CGTTTTGTAG CGAGGTTAAG CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGCGTAGA CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GGACGAACAC CTTTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA ACTCCGAATA CCAAAGAGTG CTATCCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TAATTGCTAA GTGGGAAACG ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAGCAATTCA CCGAAGCTAC GGGTGTGCAC GATAACGTGT ACGCGGTAGA GGAGCGTTCT GTAAGCCGTT GAAGGTGAAG GGGTAACCCA CACTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACGGGT TAATATTCCC GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCCAGCACGG CGTTGGTTGT CCGTGTTTAA GGTGGTAGGT AGTGTGCTTA GGCAAATCCG GGCACACATA TACCGAGAGC TGATGACGAG TCACTACGGT GACGAAGTGG TTGATGCCAT GCTTCCAGGA AAATCTTCTA AGCTTCAGGT TAGCAGGAAT CGTACCCCAA ACCGACACAG GTGGTCGGGT AGAGAATACC AAGGCGCTTG AGAGAACTCG GCTGAAGGAA CTAGGCAAAA TGGTACCGTA ACTTCGGGAG AAGGTACGCT GCTGTTGGTG ACGGGACTTG CTCCCTGAGC TGACGGCAGT CGCAGATACC AGGTGGCTGC AACTGTTTAT CAAAAACACA GCACTGTGCA AACTCGCAAG AGGAAGTATA CGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATTG GGTTATCGCA AGAGAAGCTC ATGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA TGGCCACGCT GTCTCCAGCC GAGACTCAGT GAAGTTGAAA TTGCGGTGAA GATGCCGTAT ACCCGCGGCT AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTGGCAC TGAACATTGA CCCTACATGT GTAGGATAGG TGGGAGACTT TGAAGCGGGA ACGCCAGTTC TCGTGGAGTC AACCTTGAAA TACCACCCTT GTAGTGTTGA TGTTCTAACC TCGGTCCATG AATCTGGACT AGGGACAGTG CCTGGTGGGT AGTTTGACTG GGGCGGTCTC CTCCCAAAGA GTAACGGAGG AGCACGAAGG TTGGCTAAAC ACGGTCGGAC ATCGTGTGGT TAGTGTAATG GCACAAGCCA GCTTAACTGC GAGACAGACA CGTCGAGCAG GTACGAAAGT AGGTCATAGT GATCCGGTGG TTCTGCATGG AAGGGCCATC GCTCAACGGA TAAAAGGTAC TCCGGGGATA ACAGGCTGAT ACCGCCCAAG AGTTCATATC GACGGCGGTG TTTGGCACCT CGATGTCGGC TCATCACATC CTGGGGCTGA AGTCGGTCCC AAGGGTATGG CTGTTCGCCA TTTAAAGTGG TACGCGAGCT GGGTTCAGAA CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGCGTTG GAAGATTGAG GGGGGTTGCT CCTAGTACGA GAGGACCGGA GTGAACGAAC CGCTGGTGTT CGGGTTGTCA TGCCAATGGC ATTGCCCGGT AGCTACGTTC GGAATCGATA ACCGCTGAAA GCATCTAAGC GGGAAGCGAG CCCCAAGATG AGTCTTCCCT TGGACCTTGA GTCCACTGAA GAGCCGTCCG AGACCAGGAC GTTGATAGGC AGGGTGTGTA AGCGTTGTGA GGCGTTGAGC TAACCTGTAC TAATGACTCG TGCGGCTTAA CCATACAACC CAGATGGGTT TCAG
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Protein sequence | |
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