Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3653 |
Symbol | |
ID | 4605900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4302276 |
End bp | 4303064 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639783078 |
Product | ParA family protein |
Protein accession | YP_929525 |
Protein GI | 119776785 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.109435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000954297 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGGGAAAG TCATTGCTGT AGCCAACCAG AAAGGTGGCG TAGGAAAAAC AACTACTTGC ATTAACCTGG CGGCCTCGCT TGCAGCAACC CGGCGCAAGG TGCTGCTGAT TGACCTGGAT CCCCAGGGTA ATGCCACCAT GGGCAGTGGT GTAGACAAGT ACGAGGTAGA AAATACCGCG TATGAGCTGC TCGTGGAGGA AAAGCCCTTT GCCGATGTGG TGGTGAAGGA TACTCAGGGC AAGTATGATC TCATTGCCGC CAATGGTGAT GTGACGGCCG CCGAAATCAA GCTGATGGAA TTCTTCGCCC GTGAAGTGCG TCTGCGCAAC GCGCTGGCGC CCATTCGCGA TCAGTATGAT TTTATCTTTA TCGACTGTCC GCCTTCCCTG AATATGCTCA CCGTGAACGC CATGTCCGCT GCAGACTCAG TGCTGGTGCC TATGCAATGT GAGTATTTTG CGCTGGAAGG TCTCACTGCC CTTATCGATA CCATAGGCAA GCTGGCATCC ATGGTGAATC CGGGGCTTGG CATCGAAGGA ATTTTGCGTA CCATGTACGA TCCTCGCAAT CGATTGGCCA ATGATGTGTC CGATCAGCTC AAGCAGCATT TTGGCGAGAA AGTTTACCGG ACTGTGATCC CCCGTAATAT CCGTCTGGCC GAGGCCCCGA GTTTTGGTGC GCCCGCCATG TATTACGACA AGTCCAGTGC CGGCGCCAAG GCCTACCTGG CCCTGGCCGG AGAGATTATT CGCCGGGGTG AGCAAACCCA GGCTAAAAAG CAGGCGTAA
|
Protein sequence | MGKVIAVANQ KGGVGKTTTC INLAASLAAT RRKVLLIDLD PQGNATMGSG VDKYEVENTA YELLVEEKPF ADVVVKDTQG KYDLIAANGD VTAAEIKLME FFAREVRLRN ALAPIRDQYD FIFIDCPPSL NMLTVNAMSA ADSVLVPMQC EYFALEGLTA LIDTIGKLAS MVNPGLGIEG ILRTMYDPRN RLANDVSDQL KQHFGEKVYR TVIPRNIRLA EAPSFGAPAM YYDKSSAGAK AYLALAGEII RRGEQTQAKK QA
|
| |