Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3650 |
Symbol | |
ID | 4605897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4299972 |
End bp | 4300766 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639783075 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_929522 |
Protein GI | 119776782 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000146441 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000739307 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGCTGCAA CTGGTGAAGC GTTAACACCG CAGGGCTATA TCCAGCATCA CCTGACCAAC CTTTCCGTTG GTGAAGGATT CTGGACATGG CATATTGATT CGTTGCTCTT TTCGGTTGGT CTTGGTGTTC TGTTCCTGTG GATTTTCCGT AGCGTTGGCA AGAAAGCGAC TACAGGCGTT CCCGGCAAGC TTCAGTGCTT TGTCGAGATG ATCGTCGAGT TCGTGGACAA CAGCGTGAAA GAAACCTTCC ACGGCCGTAA TGCCCTGATC GCTCCTCTCG CTCTGACCAT CTTCGTTTGG GTTTTCATGA TGAACTTCAT GGACATGGTG CCAGTTGACT GGCTGCCACA CACCGCCGCT ATGCTGGGTG TGCCTTACCT GAAAGTGGTT CCGACGACTG ACCTGAACAT CACCTTCAGC CTCGCGCTGG GTGTGTTTTT GCTGATTATT TACTACAGCA TCAAGGTCAA GGGAGTGTCT GGCTTCGTGA AAGAACTGAC ACTGCAGCCC TTTAACCACT GGGCAATGAT ACCCGTCAAC CTCCTGCTGG AATCAGTTAC CCTGATAGCC AAGCCAATCT CATTGGCTCT GCGTCTATTC GGTAACCTGT ATGCGGGTGA GTTGATCTTC ATCCTTATTG CGCTGATGTA TGGTGCCAAC TGGCTGATCG CCTCTCTGGG TGTAACCCTG CAACTGGGTT GGTTGATCTT CCACATTCTG GTTATCACAC TGCAAGCGTT TATCTTCATG ATGCTGACTA TTGTTTACCT CAGCATGGCG CATGAAGATC ATTAA
|
Protein sequence | MAATGEALTP QGYIQHHLTN LSVGEGFWTW HIDSLLFSVG LGVLFLWIFR SVGKKATTGV PGKLQCFVEM IVEFVDNSVK ETFHGRNALI APLALTIFVW VFMMNFMDMV PVDWLPHTAA MLGVPYLKVV PTTDLNITFS LALGVFLLII YYSIKVKGVS GFVKELTLQP FNHWAMIPVN LLLESVTLIA KPISLALRLF GNLYAGELIF ILIALMYGAN WLIASLGVTL QLGWLIFHIL VITLQAFIFM MLTIVYLSMA HEDH
|
| |