| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3640 |
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| Symbol | |
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| ID | 4605887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4289558 |
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| End bp | 4290322 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639783065 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_929512 |
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| Protein GI | 119776772 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000875661 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0587725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAC GCAATACTCA GCAGCGCCGC CGCAGCATTA TCGAACTTCT GAATGCTCAG
GGTGAGGTGA ATGTGGACCA ATTGGCGAGC GAGTTTGCCA CCTCTGAGGT GACTATTCGC
AAAGACCTGG CCGAGCTTGA GAAAGCGGGA CTGCTGTTTC GCCGTTATGG TGGCGCTGTG
CCCTTGCCCC AGGAGCTGAA TGCCCAGGCA GTGGCCATCT CCCCGGTGAA GCTTGCCATA
GCCAAAGAGG CAGCCAAACT CATCCGCGAC CATAACCGCA TCATCATCGA CTATGGCAGC
ACGACCCTGG GGCTTATCCC CGAGCTTGCC CATCGTCGCG GCTTGGTGGT GATGACCAAT
TCGCTGCAGC TCGCCAATGC CATTCACGAA CTGGAGCAGG AGCCCACACT TTTGATGACC
GGTGGCACCT GGGATCCGCA TTCAGAGAGC TTTCAGGGGC TGGTGGCCGA GCAGGTGCTG
CGCTCTTACG ATTTCGATCA ACTCTTTATC GGTGCCGATG GCATAGACCT CAGCCGCGGC
ACCACCACCT TCAACGAACT CGTTGGCCTG TCACGTGTGA TGGCCGAAGT ATCGCGGGAG
GTAATTGTCA TGCTGGAGTC CGACAAGATA GGCCGACGCA TTCCCAATCT CGAGCTGCCC
TGGAGTCAGG TCAGCGCAGT GGTCACAGAT AACAGATTGC CCAAAGAGGC AGTGACCATC
ATAGAGGCCC ATGGGGTGAA GGTGTATCTG GCGGATGTTC AGTAG
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| Protein sequence | MTKRNTQQRR RSIIELLNAQ GEVNVDQLAS EFATSEVTIR KDLAELEKAG LLFRRYGGAV
PLPQELNAQA VAISPVKLAI AKEAAKLIRD HNRIIIDYGS TTLGLIPELA HRRGLVVMTN
SLQLANAIHE LEQEPTLLMT GGTWDPHSES FQGLVAEQVL RSYDFDQLFI GADGIDLSRG
TTTFNELVGL SRVMAEVSRE VIVMLESDKI GRRIPNLELP WSQVSAVVTD NRLPKEAVTI
IEAHGVKVYL ADVQ
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