Gene Sama_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3639 
Symbol 
ID4605886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4287696 
End bp4289525 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content58% 
IMG OID639783064 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_929511 
Protein GI119776771 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000255668 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TCGTTGGCGC CGTGGCGCAA AGGGACGTGG CCGAAATTTT GCTCGAGGGC 
CTGCGTCGTC TGGAATATCG TGGTTATGAC TCTGCCGGTA TGGCGGTGAT TCAGAATGCC
GAAATGAACC GTACCCGTCG GGTGGGGAAA GTGCAGGAGC TGGCCGACGC ACTGGCCGAA
GCTCCTCTTA CCGGTGGCAC AGGTATTGCC CACACCCGCT GGGCGACCCA CGGTGAGCCC
AGTGAGCGTA ACGCGCACCC GCACCAGTCC GAGGGTGATA TCGCCGTGGT GCACAACGGC
ATTATCGAAA ACCATGCCAA GCTGCGTGAA CGCTTAAAGG GCCTGGGGTA TCAGTTCAAC
TCAGATACAG ACACCGAAGT AATTTGCCAC CTGGTACACC ATGAGCTGAA AAGTGCTGAT
ACCTTGCTGG CTGCCGTACA AGCCACGGTT AAGCAGCTCG AAGGCGCCTA TGGCACTGTG
GTTATCGACC GCCGCGACGC CGAGCGTATG GTAGTGGCCC GCAGTGGCAG CCCGCTGGTG
ATAGGTTTTG GTCTGGGTGA AAACTTTGTA GCCTCAGATC AACTGGCGCT GTTGCCTGTG
ACCCGTACTT TCGCCTTCCT AGAAGAAGGT GATGTGGCCG AAGTGACTCG TCGTAACGTG
CGCATCTTCG ATGTGGATGG CAATGAGGTT GAGCGTGAAG CCAAAGAATC GGAAGTAACC
CACGATGCCG GCGACAAGGG CGAATACCGC CACTATATGC TCAAGGAAAT CTACGAGCAG
CCACGTGCCC TGGCCCGTAC CCTGGAAGGC CGCATCGCCA ACATGCAGGT GCTGGACAGC
GCCTTTGGCG ACAAAGCTGC CGACCTTTTG AAAGACATCA AACACGTGCA GATCATCGCC
TGTGGTACCA GCTACCACGC GGGCATGACC GCCCGCTATT GGCTGGAACA ATGGGCCGGC
GTGTCCTGTA ACGTGGAAAT CGCGTCAGAA TTCCGCTATC GCAAGTCGCA CCTGTTCCCA
AACAGCCTGC TGGTGACCAT CTCCCAGTCC GGTGAGACCG CCGATACCCT GGCCGCGCTG
CGTTTGGCGA AGGAAATGGG CTATCAGGCC ACCCTGACCA TCTGTAATGC GCCGGGCTCG
TCGCTGGTAC GCGAATCTGA CATGGCCTAC ATGATGAAAG CCGGCGCCGA AATCGGTGTG
GCCTCCACCA AGGCCTTTAC CGTGCAACTG GCAGGCCTGT TGATGTTGAC CGCCGTGATT
GGTCGCAACA ACGGCATGTC TGCCGAGCTG CAATCCTCCT TGACCCAAAG CCTGCAATCA
CTGCCGGCCA AGGTTGAGCA GGCACTGGGC CTGGACGATG CCATTGCTTC ACTGGCCGAA
GATTTTGCCG ACAAGCATCA TGCGCTGTTC CTCGGCCGTG GCGATCAGTA CCCCATCGCC
ATGGAAGGAG CACTCAAGCT CAAGGAAATC TCCTACATCC ACGCCGAGGC TTATGCGTCT
GGCGAGCTCA AACACGGCCC GCTGGCGCTG ATTGATGCCG ATATGCCGGT GATTGTGGTC
GCGCCCAACA ACGAGCTGCT GGAAAAATTA AAATCCAACG TGGAAGAGGT GCGTGCCCGT
GGCGGCCTGA TGTATGTGTT TGCCGACAAG GACGCCGAGT TTGCGTCGGA CGACACCATG
AAGGTGATCC CCGTGCCTCA CTGTGATGAG TTTATGGCAC CGCTCATCTA TACCATTCCG
CTGCAGCTGC TGTCGTATCA CGTGGCCCTG ATTAAAGGCA CTGACGTCGA CCAGCCACGT
AACCTGGCCA AGTCAGTTAC CGTGGAGTAA
 
Protein sequence
MCGIVGAVAQ RDVAEILLEG LRRLEYRGYD SAGMAVIQNA EMNRTRRVGK VQELADALAE 
APLTGGTGIA HTRWATHGEP SERNAHPHQS EGDIAVVHNG IIENHAKLRE RLKGLGYQFN
SDTDTEVICH LVHHELKSAD TLLAAVQATV KQLEGAYGTV VIDRRDAERM VVARSGSPLV
IGFGLGENFV ASDQLALLPV TRTFAFLEEG DVAEVTRRNV RIFDVDGNEV EREAKESEVT
HDAGDKGEYR HYMLKEIYEQ PRALARTLEG RIANMQVLDS AFGDKAADLL KDIKHVQIIA
CGTSYHAGMT ARYWLEQWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAL
RLAKEMGYQA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVI
GRNNGMSAEL QSSLTQSLQS LPAKVEQALG LDDAIASLAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADK DAEFASDDTM KVIPVPHCDE FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE