| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3639 |
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| Symbol | |
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| ID | 4605886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4287696 |
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| End bp | 4289525 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639783064 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_929511 |
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| Protein GI | 119776771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000255668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.139839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTTGGCGC CGTGGCGCAA AGGGACGTGG CCGAAATTTT GCTCGAGGGC
CTGCGTCGTC TGGAATATCG TGGTTATGAC TCTGCCGGTA TGGCGGTGAT TCAGAATGCC
GAAATGAACC GTACCCGTCG GGTGGGGAAA GTGCAGGAGC TGGCCGACGC ACTGGCCGAA
GCTCCTCTTA CCGGTGGCAC AGGTATTGCC CACACCCGCT GGGCGACCCA CGGTGAGCCC
AGTGAGCGTA ACGCGCACCC GCACCAGTCC GAGGGTGATA TCGCCGTGGT GCACAACGGC
ATTATCGAAA ACCATGCCAA GCTGCGTGAA CGCTTAAAGG GCCTGGGGTA TCAGTTCAAC
TCAGATACAG ACACCGAAGT AATTTGCCAC CTGGTACACC ATGAGCTGAA AAGTGCTGAT
ACCTTGCTGG CTGCCGTACA AGCCACGGTT AAGCAGCTCG AAGGCGCCTA TGGCACTGTG
GTTATCGACC GCCGCGACGC CGAGCGTATG GTAGTGGCCC GCAGTGGCAG CCCGCTGGTG
ATAGGTTTTG GTCTGGGTGA AAACTTTGTA GCCTCAGATC AACTGGCGCT GTTGCCTGTG
ACCCGTACTT TCGCCTTCCT AGAAGAAGGT GATGTGGCCG AAGTGACTCG TCGTAACGTG
CGCATCTTCG ATGTGGATGG CAATGAGGTT GAGCGTGAAG CCAAAGAATC GGAAGTAACC
CACGATGCCG GCGACAAGGG CGAATACCGC CACTATATGC TCAAGGAAAT CTACGAGCAG
CCACGTGCCC TGGCCCGTAC CCTGGAAGGC CGCATCGCCA ACATGCAGGT GCTGGACAGC
GCCTTTGGCG ACAAAGCTGC CGACCTTTTG AAAGACATCA AACACGTGCA GATCATCGCC
TGTGGTACCA GCTACCACGC GGGCATGACC GCCCGCTATT GGCTGGAACA ATGGGCCGGC
GTGTCCTGTA ACGTGGAAAT CGCGTCAGAA TTCCGCTATC GCAAGTCGCA CCTGTTCCCA
AACAGCCTGC TGGTGACCAT CTCCCAGTCC GGTGAGACCG CCGATACCCT GGCCGCGCTG
CGTTTGGCGA AGGAAATGGG CTATCAGGCC ACCCTGACCA TCTGTAATGC GCCGGGCTCG
TCGCTGGTAC GCGAATCTGA CATGGCCTAC ATGATGAAAG CCGGCGCCGA AATCGGTGTG
GCCTCCACCA AGGCCTTTAC CGTGCAACTG GCAGGCCTGT TGATGTTGAC CGCCGTGATT
GGTCGCAACA ACGGCATGTC TGCCGAGCTG CAATCCTCCT TGACCCAAAG CCTGCAATCA
CTGCCGGCCA AGGTTGAGCA GGCACTGGGC CTGGACGATG CCATTGCTTC ACTGGCCGAA
GATTTTGCCG ACAAGCATCA TGCGCTGTTC CTCGGCCGTG GCGATCAGTA CCCCATCGCC
ATGGAAGGAG CACTCAAGCT CAAGGAAATC TCCTACATCC ACGCCGAGGC TTATGCGTCT
GGCGAGCTCA AACACGGCCC GCTGGCGCTG ATTGATGCCG ATATGCCGGT GATTGTGGTC
GCGCCCAACA ACGAGCTGCT GGAAAAATTA AAATCCAACG TGGAAGAGGT GCGTGCCCGT
GGCGGCCTGA TGTATGTGTT TGCCGACAAG GACGCCGAGT TTGCGTCGGA CGACACCATG
AAGGTGATCC CCGTGCCTCA CTGTGATGAG TTTATGGCAC CGCTCATCTA TACCATTCCG
CTGCAGCTGC TGTCGTATCA CGTGGCCCTG ATTAAAGGCA CTGACGTCGA CCAGCCACGT
AACCTGGCCA AGTCAGTTAC CGTGGAGTAA
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| Protein sequence | MCGIVGAVAQ RDVAEILLEG LRRLEYRGYD SAGMAVIQNA EMNRTRRVGK VQELADALAE
APLTGGTGIA HTRWATHGEP SERNAHPHQS EGDIAVVHNG IIENHAKLRE RLKGLGYQFN
SDTDTEVICH LVHHELKSAD TLLAAVQATV KQLEGAYGTV VIDRRDAERM VVARSGSPLV
IGFGLGENFV ASDQLALLPV TRTFAFLEEG DVAEVTRRNV RIFDVDGNEV EREAKESEVT
HDAGDKGEYR HYMLKEIYEQ PRALARTLEG RIANMQVLDS AFGDKAADLL KDIKHVQIIA
CGTSYHAGMT ARYWLEQWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAL
RLAKEMGYQA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVI
GRNNGMSAEL QSSLTQSLQS LPAKVEQALG LDDAIASLAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADK DAEFASDDTM KVIPVPHCDE FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE
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