| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3635 |
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| Symbol | |
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| ID | 4605882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4284569 |
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| End bp | 4285471 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639783060 |
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| Product | naphthoate synthase |
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| Protein accession | YP_929507 |
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| Protein GI | 119776767 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
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| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00373001 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.238188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA AAGTTTCTGA TAACTTTGAT CCAGATCTCT GGACAGAAGT ACCAGGTTTT
GCATTCGACG ACATCACCTA CCACAGGGCC AAGGATCAGG GCACGGTACG TATCGCATTT
AACCGTCCTG ACTGCCTCAA CGCCTTTCGC CCCAAAACCG TTGATGAACT CTACACCGCC
CTTGACCACG CCCGCCAATG GTCAGACGTT GGCTGTGTGC TGCTGACCGG CAACGGCCCC
TCTGCCAAAG GCCAATATTC GTTTTCCTCC GGTGGCGACC AGCGTATTCG TGGTAAAGAC
GGCTACAAAT ACGAAGGCGA AGAAGCAGGC AAGGCCGATG TGGCCCGCAT GGGCAGGTTG
CACATTCTGG AAGTGCAGCG ACTTATCCGC TTTATGCCCA AGGTGGTGAT TGCCGTTGTC
CCCGGCTGGG CCGTGGGGGG AGGTCATAGC CTGCATGTGG TGTGTGACCT GACTCTGGCC
TCAAAGGAAC ACGCGGTATT TAAACAAACC GACCCGGATG TGGCCAGCTT TGACTCTGGT
TACGGCAGTG CCTATCTCGC CAAGATGGTG GGGCAAAAAC GCGCCCGGGA AATCTTCTTC
CTCGGCTTTA ACTACAGTGC CGATGAAGCG GTCGCCATGG GCATGGTCAA TCGCAGTATT
CCCCATGCCG AGCTGGAAAC CGAAGCATTA CGCTGGGCCA AAGAGATCAA TTCCAAATCT
CCCACCGCCA TGCGCATGCT CAAATACGGC TTCAACCTGC CAGATGACGG CCTGGTTGGT
CAGCAACTGT TTGCCGGAGA GGCCACCCGC CTTGCCTATG GTACAGATGA AGCACGTGAA
GGCCGTGATG CCTTTTTGGA GAAACGGGAT CAGGATTACA GCCATTTCCC CTGGCACTAC
TAA
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| Protein sequence | MTKKVSDNFD PDLWTEVPGF AFDDITYHRA KDQGTVRIAF NRPDCLNAFR PKTVDELYTA
LDHARQWSDV GCVLLTGNGP SAKGQYSFSS GGDQRIRGKD GYKYEGEEAG KADVARMGRL
HILEVQRLIR FMPKVVIAVV PGWAVGGGHS LHVVCDLTLA SKEHAVFKQT DPDVASFDSG
YGSAYLAKMV GQKRAREIFF LGFNYSADEA VAMGMVNRSI PHAELETEAL RWAKEINSKS
PTAMRMLKYG FNLPDDGLVG QQLFAGEATR LAYGTDEARE GRDAFLEKRD QDYSHFPWHY
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