Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3633 |
Symbol | |
ID | 4606032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4282602 |
End bp | 4284026 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639783058 |
Product | iron-sulfur cluster-binding protein |
Protein accession | YP_929505 |
Protein GI | 119776765 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000320691 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.990188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAG ATTCGAATAA AAAGGACTAC TCGAAAGCCG AGCGGATTAA AATCCACCAA CCAGATGCCA GCAAGGCAGA CAGATTTAAC CCCCGTAACC GAATTTATGT CCGTGCCGTT GATGGTTTAT GGAGTAAAGT ACGTCGCCGC ATGGGCTGGG TGGCAATGTT GTTCTTCCTG TTATTGCCAT GGCTCCCATG GGGTGATAGG CAAGCAGTGT GGTTTAACCT GGCAGAACAA AAGTTTCATG TTTTTGGCCT GACAATTTGG CCCCAGGATC TGACCCTGCT GGCAGCACTC TTCATGATTG CGGCCTTTGC ACTGTTTTTT GTGACCACGT ACCTTGGGCG CGTTTGGTGT GGCTATACCT GCCCACAAAC CGTCTGGACC TTTATCTTTA TCTGGTTTGA AGAAAAACTC GAAGGTCCCC GCAATAAGCG CATCAAGATG GACCAAATGC CATGGGACTT TGATAAGGTC TGGCGCAAAA CGGCCAAGCA CGGTGCCTGG TTGCTGATCT CTTTCCTTAC AGCAACAACT TTTGTTTCCT ATTTTGTGCC CACCCGTGAG CTTTACCTGG ATGTGCTCAC CCTGAATGCC AGCGGTGGGA TTTACTTCTG GGTGGTGTTC TTTACCTTCG CTACGTATGG CAATGCCGGT TGGATGCGGG AAATCATGTG TATCCACATG TGCCCCTATG CCCGCTTCCA GGCAGCCATG TTCGATAAGA ACACTTATAT AGTGGGTTAT GATGCCGCAC GCGGTGAAAC CCGTGGCCCA CGGTCACGTA AAGCAGACCC CAAAGAAATG GGACTGGGTG ACTGTATCGA CTGCGACCTC TGTGTGCAGG TATGCCCAAC CGGTATCGAT ATCCGCAATG GTCTGCAATA TGAGTGCATC AACTGTGGTG CCTGTATCGA TGCCTGTGAC CAGACCATGG ACCGCATGGG TTATGCCAAG GGCCTTATCA GCTACACCAC CGAAAACATG CTGGAAGGTA AGAAGGAGAA AGTACTCAGG CCCAAGCTGG TGGGTTATGG TGTGGTGCTG ACGACGATGA TTTTGGTATT CGTTGGTCTC GCGGCGACTA TCTCACCGCT GCGCATCGAC GTAATCCGTG ACCGTAACGC CCTTTACCGT GAAGACAGCC GTGGCCTGAT TGAGAACACC TTTACTTTGA AGATCCTCAA CAAGACTGAA GCCGACCACG TATATAGCCT CTCGGTAGAA GATCTGCCCA ACTACCGCTG GATTGGTGAT AAGACTGTTA CGGTCAAAGC GGGAGAGGTG TTAACGCTTC CCGTCAGCGT GGCAGTAGAT CCTGTTGAAC TGAAACGCCC TATCACCAAA ATCAATATTC GTGTGGTGGC GGAAGACATG CCACAAGTCG AAGCCGTGCA GGAAACACGT TTCTTCGGGC CGTAA
|
Protein sequence | MNADSNKKDY SKAERIKIHQ PDASKADRFN PRNRIYVRAV DGLWSKVRRR MGWVAMLFFL LLPWLPWGDR QAVWFNLAEQ KFHVFGLTIW PQDLTLLAAL FMIAAFALFF VTTYLGRVWC GYTCPQTVWT FIFIWFEEKL EGPRNKRIKM DQMPWDFDKV WRKTAKHGAW LLISFLTATT FVSYFVPTRE LYLDVLTLNA SGGIYFWVVF FTFATYGNAG WMREIMCIHM CPYARFQAAM FDKNTYIVGY DAARGETRGP RSRKADPKEM GLGDCIDCDL CVQVCPTGID IRNGLQYECI NCGACIDACD QTMDRMGYAK GLISYTTENM LEGKKEKVLR PKLVGYGVVL TTMILVFVGL AATISPLRID VIRDRNALYR EDSRGLIENT FTLKILNKTE ADHVYSLSVE DLPNYRWIGD KTVTVKAGEV LTLPVSVAVD PVELKRPITK INIRVVAEDM PQVEAVQETR FFGP
|
| |