| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3632 |
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| Symbol | |
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| ID | 4605879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4275313 |
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| End bp | 4276494 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639783053 |
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| Product | putative small-conductance mechanosensitive channel |
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| Protein accession | YP_929504 |
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| Protein GI | 119776764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA TGTTGGGTGT CTCTTTCGTC ATCGCTGCAG TTGCTTATCT TATAGTTCGC
CGTGGTGTGG TGAAGGCCAT GAACCTGGTC ATCCAGCGTT CCAGTGTGAC TTGGGACGAT
GTGTTTATGA AGTACAAGGT ACTGGAAAAG CTGTCCATGC TGGTACCTGC CATGGTGCTC
GATTTGTTGC TGCCCATCGT GCTGGCTGAG CACAAACTGG CTGCGAATCT GGCCGACCGT
CTTATTAATG TCGCCTTGGT AATATTGCTT ATCAGAGCTA TTTATTCGGC GTTGGACGCT
GTGAATGAAA TTGCGGAAAT CCGTGATATC AGTCGCCGCT TACCGGTAAA AAGTGTTGTG
CAGCTGATTA AGCTTTTCCT GTTCTTTGTT GGGGTGATTA TCGGCATCTC GGTGCTGGCC
GATCAGTCAC CGGTCATCTT CCTTTCCGGT TTGGGTGTGG CGACTGGTTT GGTGATGTTG
GTGTTCAAGG ACACCATCCT GGGCTTTGTG GCGGGTATAC AGCTTGCCGC CAACCGTATG
GTGAGCAAGG GTGACTGGAT CCAGATGGAC AAGTACGGTG CCGACGGTGC CGTGGAGGAA
GTATCACTCA CCACGGTAAA GGTGCGTAAC TGGGACAATA CCCTGACCAT GATCCCGGCC
TATGCTCTGG TCTCCGATGC CTTCCGTAAC TGGCGTGGCA TGTCTGAGTC GGGTGGCCGT
CGTATTAAGC GGGCGCTGAA TATCGACATC AACAGCATAC GTTTTCTGAC TGAAGAAGAC
AGGGTACGAC TGTCGCGCAT CAATTACCTG AAAGACTACC TGCCCCGTAA GATAATTGAG
GTGACGGAAG CCAATGCCGG CATTGCCGAT ATCGATGTAC CTGTAAACGG CAGGCGTCTC
ACCAATGTGG GGACCTTTCG TGCTTATTTG ACTGAATATC TGCGTCATCA CGACAAGGTG
CACAAGGATA TGACTTTGAT GGTGCGTCAG CTTGCGCCCA CCACTGAAGG TCTGCCGCTG
GAGCTTTATA TTTTTACCAA CGACACCCGT TGGGTGGTTT ACGAGGGGAT CCAGGCAGAC
ATTTTTGACC ACATCTTTGC GATTCTGCCG GAATTTGGTT TGACGGCATT CCAAAATCCC
ACCGGGGAAG ATATTCGCAG TTTACGGCCG GTTAATTCTT GA
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| Protein sequence | MIAMLGVSFV IAAVAYLIVR RGVVKAMNLV IQRSSVTWDD VFMKYKVLEK LSMLVPAMVL
DLLLPIVLAE HKLAANLADR LINVALVILL IRAIYSALDA VNEIAEIRDI SRRLPVKSVV
QLIKLFLFFV GVIIGISVLA DQSPVIFLSG LGVATGLVML VFKDTILGFV AGIQLAANRM
VSKGDWIQMD KYGADGAVEE VSLTTVKVRN WDNTLTMIPA YALVSDAFRN WRGMSESGGR
RIKRALNIDI NSIRFLTEED RVRLSRINYL KDYLPRKIIE VTEANAGIAD IDVPVNGRRL
TNVGTFRAYL TEYLRHHDKV HKDMTLMVRQ LAPTTEGLPL ELYIFTNDTR WVVYEGIQAD
IFDHIFAILP EFGLTAFQNP TGEDIRSLRP VNS
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