Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3629 |
Symbol | |
ID | 4605876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4273257 |
End bp | 4274018 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639783050 |
Product | hypothetical protein |
Protein accession | YP_929501 |
Protein GI | 119776761 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCATTC TTTTTATGGC CCTTGGGGTA AACCCCGATT ACCCGTTGAT CCTCTGTGCC AATCGGGATG AATTTCACCA CAGACCCACG GCTCCGGCAC ATTTTTGGGC TCCCGATAAT CATATTCTGG CCGGTCAGGA CTTATTGGCC GGAGGAACCT GGCTGGGCAC CCACAGGCAA GGCAGGGTGG CAGCACTGAC CAATATTCGC AGCCCTCAGC ACCACAGCGA CAACCGCGCC AGCCGGGGTG AGCTCATCCC CAGATACCTG CAAGACCCCA ACAATTTTCC CCCCTGGCTG ATGACCCACG CGGCCAATTA CAACCCGTTT AATCTGATCT TTGGCGAAGG TCAGCGTTTC TTTTGTTTCA ACAGCCTGAA GCAGGAACAG ACTGAACTGG CCCCCGGCTG TCACGCCATC AGCAACGGTG CCATGGACGA TATCTGGCCC AAGATGGCCA GTGGACAGCG GGCACTGGAG GCCCTGTCCG CCAAGCCGGG GAAACCGGAC GAGACACTGC TGCTTGAGAT GATGAGGGAC GAGTCCAAAC CCGACGACAG CAACCTGCCA CAGACCGGTG TAAGCCTCGA ATGGGAGCGG CGCCTGTCAT CCATCTACAT CCGCCATGAA GAATACGGCA CCCGCTCAAC CAGCCTCTTG CTCATCGATA AAGCAGGTCA GCAGGAATTC ACCGAGGTGA GGTACGATGG CAAGGGGCGA ATTCTGGGTA CAGATCGCTT TACCATAGGC AGCGGCCGCT GA
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Protein sequence | MCILFMALGV NPDYPLILCA NRDEFHHRPT APAHFWAPDN HILAGQDLLA GGTWLGTHRQ GRVAALTNIR SPQHHSDNRA SRGELIPRYL QDPNNFPPWL MTHAANYNPF NLIFGEGQRF FCFNSLKQEQ TELAPGCHAI SNGAMDDIWP KMASGQRALE ALSAKPGKPD ETLLLEMMRD ESKPDDSNLP QTGVSLEWER RLSSIYIRHE EYGTRSTSLL LIDKAGQQEF TEVRYDGKGR ILGTDRFTIG SGR
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