Gene Sama_3629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3629 
Symbol 
ID4605876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4273257 
End bp4274018 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content57% 
IMG OID639783050 
Producthypothetical protein 
Protein accessionYP_929501 
Protein GI119776761 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATTC TTTTTATGGC CCTTGGGGTA AACCCCGATT ACCCGTTGAT CCTCTGTGCC 
AATCGGGATG AATTTCACCA CAGACCCACG GCTCCGGCAC ATTTTTGGGC TCCCGATAAT
CATATTCTGG CCGGTCAGGA CTTATTGGCC GGAGGAACCT GGCTGGGCAC CCACAGGCAA
GGCAGGGTGG CAGCACTGAC CAATATTCGC AGCCCTCAGC ACCACAGCGA CAACCGCGCC
AGCCGGGGTG AGCTCATCCC CAGATACCTG CAAGACCCCA ACAATTTTCC CCCCTGGCTG
ATGACCCACG CGGCCAATTA CAACCCGTTT AATCTGATCT TTGGCGAAGG TCAGCGTTTC
TTTTGTTTCA ACAGCCTGAA GCAGGAACAG ACTGAACTGG CCCCCGGCTG TCACGCCATC
AGCAACGGTG CCATGGACGA TATCTGGCCC AAGATGGCCA GTGGACAGCG GGCACTGGAG
GCCCTGTCCG CCAAGCCGGG GAAACCGGAC GAGACACTGC TGCTTGAGAT GATGAGGGAC
GAGTCCAAAC CCGACGACAG CAACCTGCCA CAGACCGGTG TAAGCCTCGA ATGGGAGCGG
CGCCTGTCAT CCATCTACAT CCGCCATGAA GAATACGGCA CCCGCTCAAC CAGCCTCTTG
CTCATCGATA AAGCAGGTCA GCAGGAATTC ACCGAGGTGA GGTACGATGG CAAGGGGCGA
ATTCTGGGTA CAGATCGCTT TACCATAGGC AGCGGCCGCT GA
 
Protein sequence
MCILFMALGV NPDYPLILCA NRDEFHHRPT APAHFWAPDN HILAGQDLLA GGTWLGTHRQ 
GRVAALTNIR SPQHHSDNRA SRGELIPRYL QDPNNFPPWL MTHAANYNPF NLIFGEGQRF
FCFNSLKQEQ TELAPGCHAI SNGAMDDIWP KMASGQRALE ALSAKPGKPD ETLLLEMMRD
ESKPDDSNLP QTGVSLEWER RLSSIYIRHE EYGTRSTSLL LIDKAGQQEF TEVRYDGKGR
ILGTDRFTIG SGR