| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3625 |
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| Symbol | |
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| ID | 4605872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4266240 |
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| End bp | 4268393 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639783046 |
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| Product | cell wall surface anchor family protein |
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| Protein accession | YP_929497 |
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| Protein GI | 119776757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.500986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCCT GCCTGTTGCT TTGCGCTCTG GGATTGCCCG GGGGAGATCT TCTGCCTTAT
CAAGGCGTGC CTGACTCTGC CGAATCCCGC GATGCCCGCG GTAATCTGAG TATTCCTGCT
GTTTATACCG ATAGGGGCGC CTGGCACGGC TTTCATCTGC CAGACGAGCG CCACGCAGGA
AGTTTTCCCG GCCCGCTGAT TATCGCACAG GAATACAGCC TGCATCTGTC GGCCGCCATG
GAGGCAGTCA GCATTGGGCG GGACGAAAAG CCCTTGGAGC AGGCTGAGTT GCAAACACAG
AGCCTGCCGT GGGGCTTATT CCAGCGACTG AGTTGGCCAG GTACAGAACT TGAAATGTCG
CTCTCGTACT TTAATAACCG TACAGCCATA GTTACCACCA AGGTGAGAAA CACGAGCGGG
GAGCCACAAA CCCTGACGCT TGAGTGGCAC GGCGCCCCCT TCGACACACA CAATTCACAG
CCGCTTACCC TGTCGCCACA GTTGCAGAAA ACGGCATCCG GGCCCAGGTT AAGTTGGTCG
ATGCTGCCGG CAAGAGATAC CTGGAATCGC CTTATCGATG GGGCCTCGTA TCGGCTGGAT
TTTGAGGGAG AACGGGAGGC CCGGCTGGAA GCTGACAAAG GTTATGTTGT AAAAACTGAC
GTTTATCTTG GCCCAGGTGA AAGTCGTGAG TACCGCACCG CCCACAGCTA TTTTCACACA
GAGCAGGAAG CCTCTGCCGG TCATTTCTTG TGGGCTGACG TTGCACCTGC ATTAAGTGCA
AACCGAACTC GCTGGCAGCA TCGCTTCGAC CAGTTGGTAG CTTCAGGAGA TCCGACGCTC
GACAGGGCTG CTGCCAAGGC CGTTATGACC TTAGCCCACA ATTGGCGCTC AGCCGCCGGT
GCTTTGCAGC GGGATGCCGT CACGCCATCC ATTACCTACA AGTGGTTCAA TGGCGTCTGG
GCCTGGGATA GCTGGAAGCA GGCGGTGGCG CTGGCAAGAT TCGATACTTT GCTGGCAAAG
TCGAATGTCG AGGCTATGTT CGACTATCAA TTCGGCGCAG ATGACCCTGT CAGACCCCAG
GATGCCGGTA ATCTCCCCGA TGCCATTTTT TATAATCCGG GGCCTGAACG TGGTGGCGAT
GGCGGCAACT GGAACGAGCG TAATGGCAAA CCGCCACTCG CTGCCTGGGC GGTATGGGAG
ATACATGCTC ATGCGCCCGA CCTGGACTTT ATCAAGCGTA TGTATCCCAA ACTGGTTGCC
TATCACAGCT GGTGGTATCG CAACCGGGAT CATAATGGCA ACGGTCTGGC CGAATACGGC
GCCAATGTCC ATCCCGCTCA TGTCCATGAT GGCAAGGCCA ACCCCAAAGC CATCCTCGAG
GCGGCGGCGT GGGAGTCGGG CATGGACAAT GCGCCCCGAT TTGACGCGCG CGACACGCTC
AACGTACTTG AGAATCGTAC CGCAGATGGT CGGCTCCTTG GTTATTCTCT GAGTCAGGAG
AGCGTTGATC TCAATGCCTA TCTTTATGCA GAAAAGCGGC TTCTGGCCAA GCTCGCCGAT
GCCCTGGGGG ATGAGGAACA CGCCAAAAGC TGGCGCAGAG ATGCTGATAA CCTGGGCAAG
CTCATTCGGG AGCAGATGTG GGATGAATCC ACAGGCTTCT TTTACGACCT CGATAGCCTG
ACCGGCAAGC CCCTGCTGGG CAGCGGTAAA GGGGTTGAGG GTTGGATTCC GTTGTGGGCC
GGTGTCGCCA CCCAGCAGCA GGCTGAGGTG ATGATTGGAC GCCAATTATC TGCGGGCACC
TTTGGCACCC CGATCCCTTT TCCCACCGTG AGTGCCGACA ATCCAGCCTT TGCGCCCAAC
AAATACTGGC GCGGTCCGGT TTGGCTGGAT CAGCTGTATT TTGCGCTGGC AGGGCTGGAA
AGATACGGCG CTCAACAGCA GGCCAAAACT CTGGCTAGGC GGCTCTTTAC CCGAGGCGAG
GGAATATTGG GACAGTCACC CATACGGGAA AATTACCAGC CGCTGACGGG TGAGGGTCTC
CATGCCACCA ATTTCAGCTG GTCTGCGTCT GTCATTCTGC TGGCCCATCA GCAATGGTTG
GTTGAAGCGG CCGGGCAACC AAAGCCATCT CAAGCACAAT CCACGACGCA GTGA
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| Protein sequence | MYSCLLLCAL GLPGGDLLPY QGVPDSAESR DARGNLSIPA VYTDRGAWHG FHLPDERHAG
SFPGPLIIAQ EYSLHLSAAM EAVSIGRDEK PLEQAELQTQ SLPWGLFQRL SWPGTELEMS
LSYFNNRTAI VTTKVRNTSG EPQTLTLEWH GAPFDTHNSQ PLTLSPQLQK TASGPRLSWS
MLPARDTWNR LIDGASYRLD FEGEREARLE ADKGYVVKTD VYLGPGESRE YRTAHSYFHT
EQEASAGHFL WADVAPALSA NRTRWQHRFD QLVASGDPTL DRAAAKAVMT LAHNWRSAAG
ALQRDAVTPS ITYKWFNGVW AWDSWKQAVA LARFDTLLAK SNVEAMFDYQ FGADDPVRPQ
DAGNLPDAIF YNPGPERGGD GGNWNERNGK PPLAAWAVWE IHAHAPDLDF IKRMYPKLVA
YHSWWYRNRD HNGNGLAEYG ANVHPAHVHD GKANPKAILE AAAWESGMDN APRFDARDTL
NVLENRTADG RLLGYSLSQE SVDLNAYLYA EKRLLAKLAD ALGDEEHAKS WRRDADNLGK
LIREQMWDES TGFFYDLDSL TGKPLLGSGK GVEGWIPLWA GVATQQQAEV MIGRQLSAGT
FGTPIPFPTV SADNPAFAPN KYWRGPVWLD QLYFALAGLE RYGAQQQAKT LARRLFTRGE
GILGQSPIRE NYQPLTGEGL HATNFSWSAS VILLAHQQWL VEAAGQPKPS QAQSTTQ
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