Gene Sama_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3617 
Symbol 
ID4605864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4257967 
End bp4258611 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID639783038 
Producthypothetical protein 
Protein accessionYP_929489 
Protein GI119776749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CTTCCCGCGG TTTTTTGGGA CGCTGGCAAG CCCGGCGTGA AGCGGTAGCC 
GCCGAAGAAG CCGCTGAGCT TGCGAACACG CAAGAGCTTA CCGACGCATC GATTACTGCT
CCTGAGGTCC TGCCGACGGC TGATGCTGCG CTGACTGATG CCCCCAAAGT GGCTGATACC
CCAGCGGACT TAAGCGCGGA GGTTGAAGCT GATGGCGCTG CCGAGGTGCC CGCTGAACCC
TTGCCGGATC CCGATTCCAT CGAGGTGGGC GGCAGTTTTG CCCGCTTTAT GTCGACCGAT
GTCGATCCAC TGACCCGCAC GGCTGCCCTG CGCGCCCTGT GGAAGCAACC CCAGTACAAC
CATATCGACG GCCTGATTGA GTATGCACTC GACTATTCCA ATCAGCCCAA ACTGAGCGCC
GATGCCTCGA TGGAGCTGGC GAAAAAGGTG TTCAGGCACG TGATGGAAGC CACCACCGAA
GAGGAAGAGC CTCAGGTCGC AGCAACGTCC GCCCCCAGGG GAGAGGTGCT GGCCGATGCG
GAGGACAATT TGCCTGAGGA GCCAGAGCAG TTGTCCCAAA ATGACCTGGA GGAAGTTACA
GAGGCAGAGA GCCCTGTCGC TCAGGGTCAG TTTAACCGAG TTTAA
 
Protein sequence
MSDTSRGFLG RWQARREAVA AEEAAELANT QELTDASITA PEVLPTADAA LTDAPKVADT 
PADLSAEVEA DGAAEVPAEP LPDPDSIEVG GSFARFMSTD VDPLTRTAAL RALWKQPQYN
HIDGLIEYAL DYSNQPKLSA DASMELAKKV FRHVMEATTE EEEPQVAATS APRGEVLADA
EDNLPEEPEQ LSQNDLEEVT EAESPVAQGQ FNRV