Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3616 |
Symbol | |
ID | 4605863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4256169 |
End bp | 4257911 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639783037 |
Product | iron-sulfur cluster-binding protein |
Protein accession | YP_929488 |
Protein GI | 119776748 |
COG category | [C] Energy production and conversion |
COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCAAAA TAAACAGAAA AACACCGACC CTTACGTACA GAAACAGCCA AAGAACTGTT CAGGAACGCA ACGTGAGCAT GATAGAGACA ACACGCAGGG CCAGACACGC GGATATCCGC AGTCAGGTAT TGGCACAAAC CCGGATCCTC GGGAACCTGA TCCCACCCAC GGTGAGTTAT TCCACCGAGG GACATGTCCT TATTCTCGGC GCAGAGGACT TGGCCCGTCT GGCCGCAGGC AAGCTGTCTG CCATGGCGAG CCTGGTGATT CTGGCCACCG ACGATATTTC CAGTCAGGAT GAAGCGCACC TCGAGCGGGT GATGAATGCC GCCCCCGATG TCGAGAGTTA TTACAACAAG CTGGTGTCCA TCAAGGGCTT TCTTGGTCAG TTTCAGGCTA CGGTGGAGCA AAATGGCACC CAGGCCCAGT TGTCTACCGT GGCGATTCGC CGCCCCCATT TCGACATAGT GCTTGATCTG TCCATTGAGC CTGCCATTCA GCTGGAACTG CTGCCACCCG GCTATTTTCA TGTTGGGCAG GACGAAGCCA AACTGGCTGA TGCGGTGGCG CAAATTCCCG ATTTGGTCGG CCAGTTCGAC AAACCCCGCT ATGTGAAGGT GAATGCCGAC CTGTGCGCCC ACAACCGCAA TGGGCTCAAT GGTTGCAACC GCTGCCTCAA TTTCTGCCCC GCTGATGCCA TTCAGAGCGT GGAAAAGAAA ATCGAAATCG ACCCTTACCT GTGTCACGGT GCCGGAAGCT GTACCAATGC CTGTCCAACG GGTGCCATCA GTTACGATTT GCCAAACCCT CAGGCGTTGC ACAGTTTCCT CAACAAACTG GTTTCCCGTT TTCGCGATGA GGCCCTCGAA GCGCCGGTGA TCCTGTTCCA CGACCAGAAT CAGGGCGCAG CGCTCATCAA TGACACCTTG CCAGGAGAGG TTCTGCCGGT AGCACTGGAA GAAATCACCG TGGCGTCAAT GGACCATTGG CTGGCGGCTC TGGCGTGGGG TGCCCGCGAA GTCTTGGTGC TCAATACCCA GGCCACAGCG CCCACCCTCA CCACCATGCT CAAGGGCGAA ATTGCACTGG CCTGTCGTAT TTTGGCCGAA ATGGGTCAGC CAGAGCGCGT GCGTTTGATT GACGAGGCTG AGCTGGCTGC GCTGACGCCT GCACTGGATA TCAGTCTGGA TTGGCCGGTG ACGGTTCCAG CCGCCTTTGG CGGTGGCAGC AAGCGCGACA CCCTGTATGC CGCGATTGAT CACCTCAACA GTCAGGCTGC CGATATCAAC AGCATTCTGC CCATGGGCAA CATCCCCTTC GGTAAGGTCA CCGTCGCCAC CGATAACTGC ACCCTGTGTA TGTCCTGTGT GGCTATTTGT CCCACAGCCG CCCTCAAGGA CGGCGGAGAT GAACCCAAGC TGCTGTTTAC CGAACAAAAC TGTGTGCAGT GTGGCCTCTG TGAAGCTGCG TGCCCCGAGA AGGTTATCAG CCTGGTGCCC CAGGTGAATT TTGATGCTCC CAGCCGTCAG GCGGCGCGGG TACTCAAGGA AGAAAAACCC TTTGAGTGTG TGCGCTGCGG CGCGCCCTTT GCGACCCAAT CCATGGTGCA CCGGATGCTG GATATGGTCG GCATGCACTC GGCATTTTCC GCCAACATCG AACGACTCAA GATGTGTGGC GATTGCCGCG TGAAAGACAT GTTTGAAGAC ATCCTTCAAG ATCCGGAAAA GCAACTGAGA TAA
|
Protein sequence | MRKINRKTPT LTYRNSQRTV QERNVSMIET TRRARHADIR SQVLAQTRIL GNLIPPTVSY STEGHVLILG AEDLARLAAG KLSAMASLVI LATDDISSQD EAHLERVMNA APDVESYYNK LVSIKGFLGQ FQATVEQNGT QAQLSTVAIR RPHFDIVLDL SIEPAIQLEL LPPGYFHVGQ DEAKLADAVA QIPDLVGQFD KPRYVKVNAD LCAHNRNGLN GCNRCLNFCP ADAIQSVEKK IEIDPYLCHG AGSCTNACPT GAISYDLPNP QALHSFLNKL VSRFRDEALE APVILFHDQN QGAALINDTL PGEVLPVALE EITVASMDHW LAALAWGARE VLVLNTQATA PTLTTMLKGE IALACRILAE MGQPERVRLI DEAELAALTP ALDISLDWPV TVPAAFGGGS KRDTLYAAID HLNSQAADIN SILPMGNIPF GKVTVATDNC TLCMSCVAIC PTAALKDGGD EPKLLFTEQN CVQCGLCEAA CPEKVISLVP QVNFDAPSRQ AARVLKEEKP FECVRCGAPF ATQSMVHRML DMVGMHSAFS ANIERLKMCG DCRVKDMFED ILQDPEKQLR
|
| |