| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3611 |
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| Symbol | |
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| ID | 4605858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4250629 |
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| End bp | 4251645 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639783032 |
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| Product | formate dehydrogenase, C subunit, putative |
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| Protein accession | YP_929483 |
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| Protein GI | 119776743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCCA AAACGTTTAA CAAGTCACTG CAGCAGCTCT GGTCTGTGGC CTTGTTGGCG
ATAGCTCTGG TGATGGGACC CGTTTCGGGT GCCTGGGCCG CCGATGAGCA ATCCAGCCAA
CAACAGGCTG TGCAAACCAG TGATGCCGAT CTGTGGCGTG CGGTAAAAGC CGGTGAATCC
GGTTATACCA CCGCCCAGGG CGTTGAGGCA GGCGTGCTCA TCAACGTGGC CGGTAATCAG
GGTAAGGAAG TCCGCAACCA GTATCTGACC CCCGTCATGG GTTTTGCTGT AGTGGGTGTG
TTCGGTGCCT TCCTGCTGTT CTATCTGGTC AACGGCCCCT CGAAGCTGCA TCACGGCTTC
TCGGGTAAGC TGGTGGCACG CTGGAGCAAG GCGGATCTGA CTATCCACTG GGTGATGGCC
ATTGCCTGTA TGCTGCTGAT CTTCACCGGT TTAACCATCA TGCTGGGGCG CCATGTACTC
GAACCCTATG TGGGCTCGGG TTTGTGGGCA TCGCTCATCT ACGGCAGTAA GACAGTGCAC
GACTTTGCCG GGCCCGTGTT TATGTTGGCC TGGATACTGT GTGTGGTGAA GTGGATGCCG
CTGCAAACCT TCAAGCTGTA TGACCTTAAA TGGTTCCTGC TGGTGGGTGG CTACATCAAC
TTTGGCCCCT TCAAGGGCAA GCATCCCGAC AGTGGTTTCG CCAATGCCGG TGAGAAGATG
TGGTTCTGGA CCCTGACCAT CTTCGGTCTG TTTATCAGCG TGACCGGGGT GATGTTGGTG
CTGCCAGGCC TGGATCTGCC GCGGGAAGCC TCAATGGCGG CCCTGCTGAT CCACGCCATC
AGTGCCATCA TCATCATCGC CTTTACCATA GTGCATATCT GGATGGCGAC AGTGCTCAGC
GAAGGTGGTA TGGAGTGTAT GAAGTCCGGT TACTGTGATG AAAACTGGGC TATTCAACAC
CACAACCTCT GGTACGATGA AATCAAAGCC AATGGCAGCT TGAAATACAA GGACTGA
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| Protein sequence | MLSKTFNKSL QQLWSVALLA IALVMGPVSG AWAADEQSSQ QQAVQTSDAD LWRAVKAGES
GYTTAQGVEA GVLINVAGNQ GKEVRNQYLT PVMGFAVVGV FGAFLLFYLV NGPSKLHHGF
SGKLVARWSK ADLTIHWVMA IACMLLIFTG LTIMLGRHVL EPYVGSGLWA SLIYGSKTVH
DFAGPVFMLA WILCVVKWMP LQTFKLYDLK WFLLVGGYIN FGPFKGKHPD SGFANAGEKM
WFWTLTIFGL FISVTGVMLV LPGLDLPREA SMAALLIHAI SAIIIIAFTI VHIWMATVLS
EGGMECMKSG YCDENWAIQH HNLWYDEIKA NGSLKYKD
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