| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3605 |
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| Symbol | |
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| ID | 4605852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4242055 |
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| End bp | 4242993 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639783026 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_929477 |
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| Protein GI | 119776737 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.245309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC GCCCCTATAA CTTGCCCCCT TTAAACGCAT TGAAATCCTT TGAAGCTTTT
AGCCGCCATC TTAATTTGCG GGATGCAGCG CAAGAGTTAT GCGTAACAGA GTCGGCGGTG
AGCCGGCAGT TAAAGCAACT GGAAGGGTAT TTGGGCGTGA AATTGTTAGA GCGGGTTGGG
CGTAACTCCC AGCTAACGGA TGTCGGCCAG CATTATTCCA GGGCGCTCAG CCAGGGGCTG
TATGTTATGA GTGAGGCGAC CGAACGACTT TTCCCACCGC TTACGCGTTA TGGTTTCCGG
CAAGTGTTAA AAATAGGGGT GGGCCCTGTA TTTGCCGAAT ACTGGTTATC CAAACGCTTG
GGAGAATTCA GGGCATTACA TCCAAATATC GACTTGGAGT TGCACGTTAA TCACAACTTA
CTTCTGGAAG CGCCATTGGA GCGCGTTGAC CTGGAGATTT ATACCGGCAA CGCGACTCAC
AATGAGTTTC TCTGTGACCG CTTGTTTCAG ATCCAGGATT TTGCCGTCTG CAGCCCGTCG
TTACTCAAAC GGATAGGTCA TGTGACCAAG GTAAGCGAAT TGCGTAAATT CCCTCTGCTG
CATGAGGGCT CCACCCACTG GTGGTCTGAA TGGTTTAAAA GTGCGGGTTG CCAACAACAG
CCCGCCAAAC ACGGCCCCAT AGTATACGAC CAAATCCAGT GTATTAAGCT GGCGCTGGCA
GGTGAGGGGA TTGCCTTGGC TGATCATATT TCGACACTCG ATCACATTAA AAATGGTGAG
CTGGTTCGGC CCACAACACA TAAATTGATC ACGGCACACT GGATTAGTTT GCTGATTAAA
CCCGAAAAGA GGCAGGAAGC CCCTGTCGTC GCCTTTAGAG ATTGGTTGCT CGGCAGCATG
CAGGAGTTCA AATCGAGCCT GGGGGATTAT CACGAATAA
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| Protein sequence | MTQRPYNLPP LNALKSFEAF SRHLNLRDAA QELCVTESAV SRQLKQLEGY LGVKLLERVG
RNSQLTDVGQ HYSRALSQGL YVMSEATERL FPPLTRYGFR QVLKIGVGPV FAEYWLSKRL
GEFRALHPNI DLELHVNHNL LLEAPLERVD LEIYTGNATH NEFLCDRLFQ IQDFAVCSPS
LLKRIGHVTK VSELRKFPLL HEGSTHWWSE WFKSAGCQQQ PAKHGPIVYD QIQCIKLALA
GEGIALADHI STLDHIKNGE LVRPTTHKLI TAHWISLLIK PEKRQEAPVV AFRDWLLGSM
QEFKSSLGDY HE
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