| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3604 |
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| Symbol | |
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| ID | 4605851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4240343 |
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| End bp | 4241677 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639783025 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_929476 |
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| Protein GI | 119776736 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA GTTCAACCTT AGCCATTACC GCCGCCCATC AGGCGCAAGT CGATATTACT
CTGCCGGCAT GGCTGCTGGG CACCGCCGAA CGGGTGATGA ACTTCTATGT TGATCGCAAT
CTGCGGCTCG ATAACCTGTC TGTTGATACC ATGCCCGCCC CAGTGCCCGG TAAAAAGTAC
ATGCTTTATG CACATGTGCC TTTCTGCCAT ACCCTCTGTT CTTACTGCAC CTTCCACCGC
TTTACCTTCA AGGAAGACAA GGCTCGCGCT TATTTTATTT CCCTGCGTAA AGAGATGACC
ATGGCGAAGG AGCTCGGTTA CGACTTCGAG TCCATGTATA TCGGTGGCGG CACCACCACT
GTGCTGGAAG ACGAGCTGGC CCGCACCATT GAGCATGCCA GACTGCTGTT CCCCTCCATT
AAGGAAGTCT CCTGCGAGTC AGACCCGCGC CACCTGGCGA GCCCCGAGTT CCGTCAGCTC
AAGGGGCTGG TTGACCGCAT GTCCATTGGG GTGCAGAGTT TCGATGACGG CATCCTCAAG
ATGACTGACC GTTTCGAAAA GTTTGGCTCG GGGCTGCAAA CCTTCGACCG TATTCAGGCG
GCCAAGGAGC TGTTCCCCAT CATCAACGTG GATCTGATTT TCGGCTTCCG GGGCCAAACC
GAAGAGGTGA TCCAGCGGGA TCTCGACATG GCCCGCCGCC TCGACCCAAG GCAGATCACC
ACCTACCCGC TGATGATCAC CCATCAGACC CGTAAGAGTG TAAAGGGCAA GCTGGCGGCG
CCCCAGGCGG ATCTGGCTCG TCAGTACAGC CAAATCCTCA CCAGCCTGCG TGGCCAGTAC
AACCAGTTGT CGAGCTGGGC ATTCGGCAAA GCCAACGATG AGGGCTTTGA TGAGTATGTA
ATTGATTATG ATGAATATCT TGGTGTGGGT TCGGGTTCGT TCAGCTTCCT CGGCGACACC
CTGTATGTGA ACACCTTCTC GCTGCGCAAA TATCAGGAGC GCATTGAGGC GGGCAAGATG
AGCGTCGAGC AGCAAAAACG CTACGACACC AAGGCCATCA TGCAGTACCG CTTCTTGCTG
GGGCTCTTCT CGGGCAGGCT GTCGCGCCAG TATTTCCGCG ACACCTTTGG CGTTAACCTT
GATACCGCGC TGTTCAAGGA AATGGCCGCC ATGAAGCTGA TTGGCGCCCT GAAAAACGAC
CCAGCCAATC CAGAGGAACT CCTGGTTACC GACAACGGCA ATCTGATGGG CCTGCTGATG
ATGAAGGAGT TTTACTCCGG CATGGATAAC GTACGGGCAC AGCTGCGTCA ACCGCTGAAG
AATTGCGATA TGTAA
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| Protein sequence | MTSSSTLAIT AAHQAQVDIT LPAWLLGTAE RVMNFYVDRN LRLDNLSVDT MPAPVPGKKY
MLYAHVPFCH TLCSYCTFHR FTFKEDKARA YFISLRKEMT MAKELGYDFE SMYIGGGTTT
VLEDELARTI EHARLLFPSI KEVSCESDPR HLASPEFRQL KGLVDRMSIG VQSFDDGILK
MTDRFEKFGS GLQTFDRIQA AKELFPIINV DLIFGFRGQT EEVIQRDLDM ARRLDPRQIT
TYPLMITHQT RKSVKGKLAA PQADLARQYS QILTSLRGQY NQLSSWAFGK ANDEGFDEYV
IDYDEYLGVG SGSFSFLGDT LYVNTFSLRK YQERIEAGKM SVEQQKRYDT KAIMQYRFLL
GLFSGRLSRQ YFRDTFGVNL DTALFKEMAA MKLIGALKND PANPEELLVT DNGNLMGLLM
MKEFYSGMDN VRAQLRQPLK NCDM
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