| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3589 |
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| Symbol | |
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| ID | 4605836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4221777 |
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| End bp | 4222739 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639783010 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_929461 |
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| Protein GI | 119776721 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA TCAAATCCCC CCACTGGGTT GCTCTGTTTG CCCTGTGCCT CACGGCTTGC
GGTGAGTCTT CGTCTGCGGT GTATGGCACC GTGGAACGTG ACCGCTTAAC CCTGACGGCG
CCCACCACAG AACTGATAGC CGAGATCAAG GTACGTGAGG GGGACAGGGT GAGTGCAGGT
ACTGTGCTGC TGCAGCTAGA CAGCCGCGCC GCCGACGCCA GGCTGGCGCA GGCAGTGGCC
AATCTCGCCC AGGCAGAAGC CCGTCTTGCG GAGCTCACCA AGGGCGCCCG GGACGAAGAG
TTGGCGCGTG CAGAGGCACG ACTCGCCGGA GCCAGGGCCA CCCTGAGTGA GGCGAGGGCC
CAGTATGAAC GCACAGTTCG TCTGGTCGCT GAGAAGGTCC TGACCGCTGC CGACCTCGAC
AGAGCCGTTG CCGGGAAAGA CAGGGCTCAG GCTGATGTCG ACAGTGCCAG CCAGGCGCTG
AAGGAATTAA TTGCCGGTAC CCGCAGCGAA CAATTATCTC AGGCCGCTGC CGCAGTGGAG
GCCGCCCAGG CTCAGGTGAC ACTTGAACAA AAATTTAAGT CAGATTTAAC CCTGATGGCC
GCACGGGATG CCGTGGTTGA CCTGTTGCCC TGGCGCGTGG GGGACAGAGT GAATCAGGGG
AGCCAACTGG TGGGCTTGCT CGTCCAGAAT GCTCCCTATG TCCGGGTCTA TCTGCCTGCC
TCTGCCCTCG ATAAACTGCT TCCCGGCGCC GAGGTTGGAG TGCGGGTGGA TGGGCGGCCG
GAGCCGGTCA TGGGCAAGGT GCGCAATATC CGCAGCGAAC CCGCCTTTAC CCCTTTTTAT
GCACTAAACG AGCGTGACAG GGCTCGCCTG ATGTACCTGA CCGATATCGA CTTGCCTGTG
GACGCAGGGT TGGCCACCGG GCTTGCTGTG GAAGTCTTGT TGCCGGAGGC AAACCATGAG
TGA
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| Protein sequence | MKLIKSPHWV ALFALCLTAC GESSSAVYGT VERDRLTLTA PTTELIAEIK VREGDRVSAG
TVLLQLDSRA ADARLAQAVA NLAQAEARLA ELTKGARDEE LARAEARLAG ARATLSEARA
QYERTVRLVA EKVLTAADLD RAVAGKDRAQ ADVDSASQAL KELIAGTRSE QLSQAAAAVE
AAQAQVTLEQ KFKSDLTLMA ARDAVVDLLP WRVGDRVNQG SQLVGLLVQN APYVRVYLPA
SALDKLLPGA EVGVRVDGRP EPVMGKVRNI RSEPAFTPFY ALNERDRARL MYLTDIDLPV
DAGLATGLAV EVLLPEANHE
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