Gene Sama_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3580 
Symbol 
ID4605827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4215225 
End bp4215650 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content52% 
IMG OID639783001 
Productmolecular chaperone (small heat shock protein) 
Protein accessionYP_929452 
Protein GI119776712 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC GTCCCTGGAA TCCTGCTGAA ACTTTCGACG ACATGCTGCG CCGGTTTGAG 
CCCATGTTGC ACTGGCCCAC CGCCATGGTA AATGGCCAGC GTAACTGGTT ACCTGCGACC
GATATCAGCG AAAACGCCGA AAGCTATCAG CTGAAAGTCG AAATGCCCGA GATCAGCAAG
GATGATATCC AATTGGCCGT CGAAGATGGC TATCTGGTTC TCAGTGGCGA ACGCAAGTAT
GAGCACACCG ACGATAAGCA GCATCTGAAC GAGCGATTCC ACGGGCAATT TACCCGCCGC
TTCCAGTTGC CTGACAACGT TGACGATACT GCCATCGATG CCCGATTCGA AAACGGCATG
TTATACCTGA CCCTGCCAAA GACAGAGGTC AAAAAAGAAC GCTGCCAACG GATTGATATC
CACTAG
 
Protein sequence
MKLRPWNPAE TFDDMLRRFE PMLHWPTAMV NGQRNWLPAT DISENAESYQ LKVEMPEISK 
DDIQLAVEDG YLVLSGERKY EHTDDKQHLN ERFHGQFTRR FQLPDNVDDT AIDARFENGM
LYLTLPKTEV KKERCQRIDI H