| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3571 |
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| Symbol | |
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| ID | 4605818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4206476 |
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| End bp | 4208269 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782992 |
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| Product | AMP-binding family protein |
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| Protein accession | YP_929443 |
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| Protein GI | 119776703 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCG AGCAATTTCA TCTGGTCAGG CTGCTCAAAG CCGAGACTCA ACACAATCCC
GATGCCATCG CCCTGAAAGG CTTTGAAATG GCCGCTCCCT GGGATGCTGT TAGCCGCAAG
ACCTTCGATC ACAGCAGCGA CAGTCTGGCG ATGCAATTGA TTGCCGGTGG GTTGGGCGTG
CAGGCCAGGG TGGGCATTAT GTCGAACAAC TGTCCACAGT GGACGGTTGC GGATGTGGCC
TCTCTCAAGG CCCGCGCCGT GGTCGTGCCC ATCTATCCCA CCAGTACCCT CGAGCAGGCG
GCTTACATAC TCAATGATGC CGAAGCCAGT TGGCTGTTTG TGGACAATGC CGAGCGCTAT
GGGCTTGCCT GCGAGCTGCG TGCCCTGTGC CCACAGCTTA AGTCGATAGT GGTGTTTGAT
GACGCTGTGA CGCTTGCTCA CGGCAATGAC CTCCACCTGA GCCAACTTTT GATGGCTGTG
CCCGATGGCG AAGCGGCCAA GGAGCTGGGA GTCCGCCTGG CGCAGGCCAA TCTGGACGAT
TTGCTGACGC TTATCTACAC CTCGGGCACC ACAGGGGAAC CCAAGGGTGT GATGTTACCC
CATAGAGCCA TAGCGTCCAC CATTCGCCAG CACGACAAAC GCCTGGCCTT TACCGAAGGT
GATGTGTCGC TGGCGTTCTT GCCACTGAGC CATATTTTTG AACGTGCATG GAGTTTTTAT
GTGCTTGGGC GCGGCGGCTG CAATGTGTAT CTGACCGACA CCAATCGCGT GAAAGAAGCC
ATAGCGGCGG TGCGCCCTCA CACCCTGTGC GTGGTGCCTC GCTTCCTTGA AAAAGTCTAC
AGCGCGGTGC AGGACAAGTT GTCCCGTGCG CCGGCATCCC GTAAGGCCCT GTTTGCCTGG
GCCATGTCAG TGGGTGGGCG CCGCTTTGAG GTGGCTCAGG GCCGCGCCAA AGGTGGCGTG
CTGTTGTCCC TGCAGGCCAG ACTGGCCGAT AAGCTGGTGG GCCGCAAGAT TCGTGATGTG
CTGGGTGGCC GACTCAAATT TATGCCCTGT GGCGGCGCGG CGCTTAACAC CGATGTGGGC
GCATTTTTCA ATGCGGTAAA CGTGCCTGTG TTATGTGGCT ATGGTCTCAC CGAAACCACT
GCCACGGTAA CCTGCAATAC CCTGGATAAC CGGGTACCCG GATCTAACGG TCAGTGTTTG
CCCGAGGTGG AAATCCGCAT CGGTGAAAAC GATGAAATCC TGGTTCGTGG CGATACCGTG
ATGACCGGCT ATTACAAGCG CCCCGAAGAT ACAGCCAGCG CCTTTGACAA TGGCTGGTTT
AAAACCGGTG ATGCCGGGCG ATTGGATGAG GCCGGTAACC TGTTTATTAC CGATCGCATC
AAGGAGCTGA TGAAGACCAG TAACGGCAAA TATATCGCAC CCCAGCGGGT GGAAGGTGTT
GTGGGGCGTT GCCCCTTTAT AGAGCAGGTG GCGGTGATTG CCGATGCCCG CAATTATGTG
ACCGCGCTGA TTGTGCCGGC CTATGAGGCG CTGGAGGCCT GGGCCAGGGA AAAAGGGCTC
AAGTACGAAT CCCCATTGGA GCTTATCCGC CACAGCCACG TGCTGGAGCA CTTTGAAGCC
CGGCTTAAGC TGATGCAGGA AGGGTTGGCA GGCTTTGAAC AAATCAAAAA GTTCACCCTG
CTGCCAGATG CCTTCACAAC GGAATCTGGC CTGATTACTC CTACGTTAAA GCTGAGGCGC
AAGGTGATTT ATCATAAGTA TCAGCGGGAA ATCAGTGCCA TGTATGGCAA CTGA
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| Protein sequence | MSLEQFHLVR LLKAETQHNP DAIALKGFEM AAPWDAVSRK TFDHSSDSLA MQLIAGGLGV
QARVGIMSNN CPQWTVADVA SLKARAVVVP IYPTSTLEQA AYILNDAEAS WLFVDNAERY
GLACELRALC PQLKSIVVFD DAVTLAHGND LHLSQLLMAV PDGEAAKELG VRLAQANLDD
LLTLIYTSGT TGEPKGVMLP HRAIASTIRQ HDKRLAFTEG DVSLAFLPLS HIFERAWSFY
VLGRGGCNVY LTDTNRVKEA IAAVRPHTLC VVPRFLEKVY SAVQDKLSRA PASRKALFAW
AMSVGGRRFE VAQGRAKGGV LLSLQARLAD KLVGRKIRDV LGGRLKFMPC GGAALNTDVG
AFFNAVNVPV LCGYGLTETT ATVTCNTLDN RVPGSNGQCL PEVEIRIGEN DEILVRGDTV
MTGYYKRPED TASAFDNGWF KTGDAGRLDE AGNLFITDRI KELMKTSNGK YIAPQRVEGV
VGRCPFIEQV AVIADARNYV TALIVPAYEA LEAWAREKGL KYESPLELIR HSHVLEHFEA
RLKLMQEGLA GFEQIKKFTL LPDAFTTESG LITPTLKLRR KVIYHKYQRE ISAMYGN
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