Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3568 |
Symbol | |
ID | 4605815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4202644 |
End bp | 4203390 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639782989 |
Product | hypothetical protein |
Protein accession | YP_929440 |
Protein GI | 119776700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.550402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAAAA TTTGTGGTTT TTTTGGCGTT TTGTTGATGT TTTTCAGCCT GTTTTTTGGT GTCAGGAGTG AAGAGGCGCC TCTGGTGTTT ATCAACGCCA GAGGCGAACA CAACAGTGGT TATCAATGGC TGCAGCTCGT GTATGACGAA GCATTTAAGC GGTTGGGTAA GGAGTATGAA GTTAGCATCT ATCCCGATAA GCGGGGAGAG CTTTTATTGG CGCAGGGTAT TGTCGATGGC GACCTGGCCA GAACCGAAGA TTTTATTGTA TTGCACCCCA ATCTCATTTT GGTGCCTGTG GCGGTGGCAT GGAGCAATGT GGCAGCTTTC ACCACCAGGG AAGACTTGGT ATTGCAACAG TGGGAAGATT TGGCCCTGTA TGATTTAAAA GTGGAATACC GCCGTGGTGC CGTCTTGGCT GAGACGCGCC TGGTGCCTCT CATCAAGCCG GAAAATCTGT CCATCGCCAA TGACTGGGAA ACGGGGATCC GCAAACTGCT CGCTGGCCGA ACCGATGTGT ATGTGGATAT AGAGGTCGAT GTGATCTCGC TCCTTGCCAG CGGCGCCTTC CCCAACACAA ATCTGAAAAT GGCCGGGGTA CTGGAAAAAG TCTATGGCTA CCCCATACTG CACCCAAAGA ATGCTGCCTT GGCAAAGCCC TTGGAAAAGG TGTTGGGAAG CATGACCCGG GAAGGGTTAA TTGAGTCCTA CCGACGTCAG GCTTTGGAAG CTGGCAGCAG TCCTTAA
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Protein sequence | MAKICGFFGV LLMFFSLFFG VRSEEAPLVF INARGEHNSG YQWLQLVYDE AFKRLGKEYE VSIYPDKRGE LLLAQGIVDG DLARTEDFIV LHPNLILVPV AVAWSNVAAF TTREDLVLQQ WEDLALYDLK VEYRRGAVLA ETRLVPLIKP ENLSIANDWE TGIRKLLAGR TDVYVDIEVD VISLLASGAF PNTNLKMAGV LEKVYGYPIL HPKNAALAKP LEKVLGSMTR EGLIESYRRQ ALEAGSSP
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