Gene Sama_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3568 
Symbol 
ID4605815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4202644 
End bp4203390 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID639782989 
Producthypothetical protein 
Protein accessionYP_929440 
Protein GI119776700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.550402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAAA TTTGTGGTTT TTTTGGCGTT TTGTTGATGT TTTTCAGCCT GTTTTTTGGT 
GTCAGGAGTG AAGAGGCGCC TCTGGTGTTT ATCAACGCCA GAGGCGAACA CAACAGTGGT
TATCAATGGC TGCAGCTCGT GTATGACGAA GCATTTAAGC GGTTGGGTAA GGAGTATGAA
GTTAGCATCT ATCCCGATAA GCGGGGAGAG CTTTTATTGG CGCAGGGTAT TGTCGATGGC
GACCTGGCCA GAACCGAAGA TTTTATTGTA TTGCACCCCA ATCTCATTTT GGTGCCTGTG
GCGGTGGCAT GGAGCAATGT GGCAGCTTTC ACCACCAGGG AAGACTTGGT ATTGCAACAG
TGGGAAGATT TGGCCCTGTA TGATTTAAAA GTGGAATACC GCCGTGGTGC CGTCTTGGCT
GAGACGCGCC TGGTGCCTCT CATCAAGCCG GAAAATCTGT CCATCGCCAA TGACTGGGAA
ACGGGGATCC GCAAACTGCT CGCTGGCCGA ACCGATGTGT ATGTGGATAT AGAGGTCGAT
GTGATCTCGC TCCTTGCCAG CGGCGCCTTC CCCAACACAA ATCTGAAAAT GGCCGGGGTA
CTGGAAAAAG TCTATGGCTA CCCCATACTG CACCCAAAGA ATGCTGCCTT GGCAAAGCCC
TTGGAAAAGG TGTTGGGAAG CATGACCCGG GAAGGGTTAA TTGAGTCCTA CCGACGTCAG
GCTTTGGAAG CTGGCAGCAG TCCTTAA
 
Protein sequence
MAKICGFFGV LLMFFSLFFG VRSEEAPLVF INARGEHNSG YQWLQLVYDE AFKRLGKEYE 
VSIYPDKRGE LLLAQGIVDG DLARTEDFIV LHPNLILVPV AVAWSNVAAF TTREDLVLQQ
WEDLALYDLK VEYRRGAVLA ETRLVPLIKP ENLSIANDWE TGIRKLLAGR TDVYVDIEVD
VISLLASGAF PNTNLKMAGV LEKVYGYPIL HPKNAALAKP LEKVLGSMTR EGLIESYRRQ
ALEAGSSP