Gene Sama_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3566 
Symbol 
ID4605813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4200761 
End bp4201255 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content51% 
IMG OID639782987 
ProductMarR family transcriptional regulator 
Protein accessionYP_929438 
Protein GI119776698 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT ACATGGACGC CGTAGATAAA ATTCTGGCGC AGTGGGCAAA AGAGAAACCC 
GACATGGATA CCCTTTCAAT GGGTATCATG GGTCGCCTGG CAAGACTCAC CAAACATCTG
GAGCAGGAAA TTACGCTTTG CCACAAAGCA TATGGCCTCA AACCCGGCGA GTTTGATGTA
CTTGCCACCT TGAGAAGAAG CGGCGCTCCC TATCGACTAA CACCATCGGA TTTGCTGTCT
GCCATGATGC TCACATCCGG GGCCATGACC AACAGACTCG ACCGCTTGGA GGCCAAAGGT
TTTATTGCCC GTGAGCACTG TCAGAAGGAC AGACGCAGTG TCGAAGTTTG TCTGACTCCC
AAGGGAATTT CAACCCTGGC GCAGGTACTC TCGCGTCATG TCGAGACGCA AAATAGGGTA
CTGTCCAAAT TGGGGCGGGA TGAGCAACTG CTCCTCAGCC GACTATTGAA AGACTGGCTT
GCTCATTTTG AGTAA
 
Protein sequence
MRFYMDAVDK ILAQWAKEKP DMDTLSMGIM GRLARLTKHL EQEITLCHKA YGLKPGEFDV 
LATLRRSGAP YRLTPSDLLS AMMLTSGAMT NRLDRLEAKG FIAREHCQKD RRSVEVCLTP
KGISTLAQVL SRHVETQNRV LSKLGRDEQL LLSRLLKDWL AHFE