| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3550 |
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| Symbol | |
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| ID | 4605797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4182295 |
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| End bp | 4183149 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782971 |
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| Product | nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_929422 |
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| Protein GI | 119776682 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGA TACTCGGCGC CAGTGGTGAA CTGGCCACCC TTACTGCCAA TGCCCTGAAC
ACTCTTGGCA ATACCGAAAT TGTACGACTG GGCAGCCGCT CACCGGACAA ACTGGATGCG
ACACTTGGCC ATGTTGTGTT TGCCGACTAT GACCAGCCAG ACTCTCTGGA TGCAGCCATG
GCGGGAGCAG ACAAGGTACT GTTTATTTCC GGTAATACCC CCAATGATAT CCGTCTGGGT
CAACATCTGC GGGTTATCGC CGCCGCCAAA AAGGCCGGGG TTGCCCAGCT GGTATACACC
AGTTTTCAAT CACCCTCGCT GGACAGCGCC TTCAGTTTCG GCGCCAGTCA TGCCGCCACC
GAAGCGGCCA TCAGCGCGGC AGCCATTCCC GCCACTGTGG TACGCAATGC CTTTTATGCC
GAGCTGCAAC TGATGGGCCT GAGCCACACA CTGGAGACAG GCGTACTGAC CCATGCCGCA
GCAGAGGGCC GCTTTGCCCC CGTAAGCAAA CAGGATTTGG CCGAGGCGCT GGCGCGAATA
TTGATGACCG ATGGCCACAC AGGCAAGATT TACGAACTGA CCGGGCCTGA ACTCCTGTCC
TATGCGGACA TCGCCGCCCT GATTGGACAG CTCAGTGGTA ACGCCATCAG TACCCACCTC
ATTTCGGCCC AGGCCCAAGT CGATACGCTG CTGAATATGG GATTACCGGC ATTTTTAGCC
ACGGCACTCG GCGGGGCCAG TCGGGCCATT GCCGCAGGGG AATATGATAA GCGCAGCGAT
GATTTAGCCC TGCTGCTTGG CCGCGCACCC ACAAGTTTGG CCACTGTCAT CAAAGGAGCG
TTGAAGCCAA ACTGA
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| Protein sequence | MILILGASGE LATLTANALN TLGNTEIVRL GSRSPDKLDA TLGHVVFADY DQPDSLDAAM
AGADKVLFIS GNTPNDIRLG QHLRVIAAAK KAGVAQLVYT SFQSPSLDSA FSFGASHAAT
EAAISAAAIP ATVVRNAFYA ELQLMGLSHT LETGVLTHAA AEGRFAPVSK QDLAEALARI
LMTDGHTGKI YELTGPELLS YADIAALIGQ LSGNAISTHL ISAQAQVDTL LNMGLPAFLA
TALGGASRAI AAGEYDKRSD DLALLLGRAP TSLATVIKGA LKPN
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