Gene Sama_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3542 
Symbol 
ID4605789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4174196 
End bp4174591 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content57% 
IMG OID639782963 
Producthypothetical protein 
Protein accessionYP_929414 
Protein GI119776674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC ATCTGAGTAC CTACGCCACC GACTACATCG CCACCCGCGA CTTTTATAGC 
GCCGCCTTTG CGCCCCTGGC TTACCCACTG TTGTTTGAAG AGGCGACCAG TTGGGATCCA
ACCTGGCCGA CCCGACGCAT GTGCGCCTTT GGTCCCGAAG GAAAACCCAT TTTCTGGGTG
ATTGAAAGCC GTGAGCCGGC TTCGCCCAGG CACACCGCTT TTGTGGCGCC AAACCGTGTT
GCGGTGGCCG GGTTTTACCT TGCAGGCCTG GCTGCTGGAG GTAAAGACAA CGGCGCTCCC
GGTTTAAGGC CCATCTACCA TGAGCATTAT TTTGGTGCGT TTCTGCTGGA CCCCGATGGC
AACAATGTGG AAGCGGTCTG CCATACGCCG GAATAA
 
Protein sequence
MIDHLSTYAT DYIATRDFYS AAFAPLAYPL LFEEATSWDP TWPTRRMCAF GPEGKPIFWV 
IESREPASPR HTAFVAPNRV AVAGFYLAGL AAGGKDNGAP GLRPIYHEHY FGAFLLDPDG
NNVEAVCHTP E