Gene Sama_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3538 
Symbol 
ID4605785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4169634 
End bp4169801 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content46% 
IMG OID639782959 
Producthypothetical protein 
Protein accessionYP_929410 
Protein GI119776670 
COG category[S] Function unknown 
COG ID[COG0401] Uncharacterized homolog of Blt101 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCA ATAAACTACT GCTGGTGATC ATCGCCATAT TGCTGCCTCC CGTGGCGGTA 
TTTTTAAAAG AAGGTGCGGG AAAGCATCTG CTGATCAATA TTATTTTGTG TCTGTTTTTC
TGGGTTCCCG GCCTGTTGCA CGCCCTGTGG GTCGTAACTA AAAGCTAA
 
Protein sequence
MDTNKLLLVI IAILLPPVAV FLKEGAGKHL LINIILCLFF WVPGLLHALW VVTKS