| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3536 |
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| Symbol | |
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| ID | 4605783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4167661 |
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| End bp | 4168335 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782957 |
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| Product | pseudouridine synthase RluA-like protein |
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| Protein accession | YP_929408 |
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| Protein GI | 119776668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCA TCATCGCCGA CGAGACGGAC TTTCTCGTTA TCGACAAGGC ACCGGGCGTG
CACTTTCACA GCCAGGATGG CAGCGCCGGT GTAGTGGCGC AGGTTGAATC CGATTTGGGG
ATAGATCTCT ACCCCGTGCA TCGATTGGAC ACCCTCACCT CTGGCCTGAT CATACTGGCC
AAATCCAGTG CCGCTGCAGC AGACTTTACC GAGCTGTTCA GCCGTCACGG GGTGCAGAAA
TACTATCTGG CGCTTGCCAA AGGCAAGCCA AAGAAGAAAC AGGGCAAGAT TGCAGGTGAT
ATGGCCAAGT CACGCCGCAG CCAATACAAG TTACTGCGGA CCATGGAAAA CCCGGCCGTC
ACCCAATTTT TCTCTGCCTC GGTGGCCGAG GGATTAAGGG CCTACCTGCT CAAGCCCCTC
ACCGGAAAAA CCCATCAGCT CAGAGTGGCT CTGGCAAGCC TGGGCACCCC CATACTCGGT
GATACCCTTT ACGGAGGCGA GAGCTCAGAC AGGGGGTATT TGCACGCCTG GCAACTGGAG
TTCCAATTTC GAAGTCGGGA TTACCGTTTT GAAAGTAAGC CCTCGGTGGG CGAAGCCTTC
TGTTCAGACA CCTTATCACA ACAGCTCAAA AACGACTGGT GCAATCCATC AGACCTGGAG
TGGCCCGGCC GCTGA
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| Protein sequence | MYRIIADETD FLVIDKAPGV HFHSQDGSAG VVAQVESDLG IDLYPVHRLD TLTSGLIILA
KSSAAAADFT ELFSRHGVQK YYLALAKGKP KKKQGKIAGD MAKSRRSQYK LLRTMENPAV
TQFFSASVAE GLRAYLLKPL TGKTHQLRVA LASLGTPILG DTLYGGESSD RGYLHAWQLE
FQFRSRDYRF ESKPSVGEAF CSDTLSQQLK NDWCNPSDLE WPGR
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