Gene Sama_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3531 
Symbol 
ID4605778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4163542 
End bp4164654 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content56% 
IMG OID639782952 
Productmolybdenum ABC transporter, ATP-binding protein 
Protein accessionYP_929403 
Protein GI119776663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA GCACTGAGCT TCGGGTCCAG ATTAGGCAAA CCAAAGGCAT ACGTATCGAG 
GCCGATTTTA GCTGCCGTGC CGGTGAATTT TTGGCTGTGG TTGGGCCTTC GGGGGGCGGC
AAAACCACGC TGCTCAGGAT GATTGCCGGG CTCGCCAAAC CCGAGAATGG CAGCATTCGC
TGCGGCAAAC GCATCTGGTT TGACAGTGAT GAGGGCATTC ACTGTTCACC CCAGAATCGG
CATATAGGTT TTGTCCCCCA GCATTTTGGC TTGTTTCCCA AACTCAGCGC CCTTGGCAAC
ATCATGGCTG CCCTGGACCA TCTGCCCAGC CAAGAACGCA GGCCCAGAGC CTTGGCTGCG
CTTGAAAAGG TTAATCTGCA TGGTTTGACC GATCGCCTGC CTTCTCAGCT TTCCGGCGGC
CAAAAACAGC GCGTTGCACT GGCAAGAGCA CTGGCGCGGG AACCCAGGGT ATTACTGCTG
GACGAGCCCT TCTCAGCCGT CGACCGTGAA ACCCGGGAAC GCCTTTATCT GGAACTGGCC
AGACTCAAGG CAGAACTCAA TATTCCGGTG ATTATGGTCA CCCACGACCT GAATGAAGCC
TTGCTGCTTG CCGACAGTAT GCTGCTGATT AGTCAGGGAC ATATGCTGCA ACACGGCACG
CCACAGGACG TCTTTTCCCG CCCCCGAAAC GAAGCCGTAG CCCGGCAAAT GGGACTGCGA
AATATCTTCA ATGCCCATGT CGTCGCCCAG GACTGTGCCA AGGGGGTGAC CTGGCTGAAA
TTCGGTGACC GCCTGATTGC CTCCGACAGC CTGCCCCGCG TCAACATTGG CGACAAGGTG
CGCTGGGTGA TCCCCAATCA GGGAATACGC TTCAACTCCA TTGCCAGCGG CCGTTTGTGT
CGCAGTTTCA ATATCCTGCC AATCCATATC GACAATATGC TCACCCTGGG AGAATCGGTT
CGACTTGAAG CCAGTGTTCA GGACTCCGGA GAAAGACTCA ACGTCGAGAT CCCGTTGCAT
TTGGCTCACA AGTTGGCGCT GACCCAAGGC GCCGCCACCG AGGTAGCACT CAAGTCAGAT
CAGGTGCACA TCCTGGAGAT GATCAAAGCT TAA
 
Protein sequence
MSGSTELRVQ IRQTKGIRIE ADFSCRAGEF LAVVGPSGGG KTTLLRMIAG LAKPENGSIR 
CGKRIWFDSD EGIHCSPQNR HIGFVPQHFG LFPKLSALGN IMAALDHLPS QERRPRALAA
LEKVNLHGLT DRLPSQLSGG QKQRVALARA LAREPRVLLL DEPFSAVDRE TRERLYLELA
RLKAELNIPV IMVTHDLNEA LLLADSMLLI SQGHMLQHGT PQDVFSRPRN EAVARQMGLR
NIFNAHVVAQ DCAKGVTWLK FGDRLIASDS LPRVNIGDKV RWVIPNQGIR FNSIASGRLC
RSFNILPIHI DNMLTLGESV RLEASVQDSG ERLNVEIPLH LAHKLALTQG AATEVALKSD
QVHILEMIKA