Gene Sama_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3530 
Symbol 
ID4605777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4162881 
End bp4163558 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID639782951 
Productmolybdenum ABC transporter, permease protein 
Protein accessionYP_929402 
Protein GI119776662 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGC AGTCGCTTTG GCTCTCAGGC AAACTGGCGC TGGTGACAGT GCTAATCCTC 
CTGCCACTGT GCGTATTTGC CGGACGCGCC CTTGCCTACC ATCAGTTCCG CGGTAAAAGC
CTGATTGAGG CTCTCATCAT GGTGCCACTG GTATTGCCCC CTACAGTGGT AGGTTACTAC
CTGCTGGTCA GCTTCGGCAG CGAGAGTTGG CTCGGCCAAT GGCTCAGAAA TACCTTCGGC
ATTGAGCTGG TGTTCCATTT CTCTGGTCTG GTACTGGCAT CAATCTTGGT CAATATCCCC
TTTGCCTTGC AGCCCATACA GCGGGCCTTC GAAGCCATTC CCGTGGATGT TCGCGACGCG
GCTGCCTGTT GTGGCATGAG TAAAAGTAAA ATCCTCACCC GTATTGAACT GCCGATGATC
TGGCCCGGCC TGGTCACGGC GTTGGTGCTC ACCTTCTCCC ATGTACTGGG AGAATTTGGT
GTGGTGCTGA TGATGGGTGG CAATATCAGC GGCGAAACCA AAACCATCTC CATCGCCATC
TACGACAGCG TCCAGGCGTT TGACTTTGAT GCCGCCGGGA TCATGTCACT TATCCTGCTG
CTTTTTGCCA TCAGTGCCCT GGCGCTGACG ACCAGTCTTT CTCGTCGAAT GGGAGGTCAG
CATGAGCGGC AGCACTGA
 
Protein sequence
MDWQSLWLSG KLALVTVLIL LPLCVFAGRA LAYHQFRGKS LIEALIMVPL VLPPTVVGYY 
LLVSFGSESW LGQWLRNTFG IELVFHFSGL VLASILVNIP FALQPIQRAF EAIPVDVRDA
AACCGMSKSK ILTRIELPMI WPGLVTALVL TFSHVLGEFG VVLMMGGNIS GETKTISIAI
YDSVQAFDFD AAGIMSLILL LFAISALALT TSLSRRMGGQ HERQH