Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3523 |
Symbol | |
ID | 4605770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4157301 |
End bp | 4158953 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639782944 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_929395 |
Protein GI | 119776655 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG AATTCATGGA GTTCGATGTT GTTATCGTGG GTGCAGGCCC TGCCGGATTG GCGACAGCCT GCCGCTTAAT GCAGATTAGC CGTGATGCAG AAAAGGAACT GACCGTTTGC GTGGTTGAAA AAGGTTCTGA GGTCGGCGCA CATATTTTAT CGGGCGCCGT GTTTGAGCCC AATGTGCTGG ATGAGCTGTT CCCTGATTGG CGTGAAACGG GCGCTCCGCT CAATACCGCC GTGACCCACG ATGAAATCCA TCTGCTCAAG TCCCCCCAGG ACGGCAAACT GATGCCCAAT GCCATGGTGC CCAAAACCAT GCACAACGAA GGCAACTACA TCATTAGTGT AGGCAACCTG GTGCGATGGC TCGGCGGTCG CGCCGAAGAG CTGGGTGTGG AAATTTTCCC GGGCTTTGCC GCCAGTGAAC TCCTGTTTAA CGACGATGGC AGCGTTAAAG GCATCCTCAT CGGTGACATG GGCATAGGCG CTAATGGTGA GCCCAAAGAC AGTTTTATGC CCGGCATGGA GCTGCACGCC AAATACACTG TGTTTGCCGA GGGCTGTCGC GGTCATCTCG GTAAGCAGTT GATTGAAAAG TTCCACTTGG ACAACGGCAA GACCCCACAG CATTACGGTC TGGGTTTCAA AGAACTGTGG AAAGTACCCG AAGGCAAGCA CACGCCGGGA CTGGTGGTGC ATACCGGTGG CTGGCCGTTG ACCGAGTCCA AGTCATCCGG TGGTGGCTTC CTCTACCATA TGGAAGATAA CCAGGTGGTG GTTGGCCTCA TTATCGACCT GAATTACCAG AATCCGCACC TGAGCCCCTT CGATGAGTTT CAGCGTTACA AGACCCATCC GGTGATTGCC CAGTATCTGG AAGGCGGCGA GCGCATCTCT TACGGCGCCC GTGCCATTAC CAAGGGTGGC CTGAACTCTC TGCCCAAGAT GAGTTTCCCC GGTGGTTTGC TGATTGGCTG TGATGCAGGC ACTCTGAACT TTGCCAAGAT TAAAGGCACA CATACCGCCA TGAAGAGTGG CATAGTGGCG GCTGAAACCC TGGCCGAAGC CCTGTTTGTT GGGGTCGAGG GGGGTAAGGA TCTGGATTGC TTCCAGGAGC GATTTGAGCA GAGCTGGCTT GGTGATGAAC TGCACCGCTC CCGTAACTTT GGCCCGGCCA TGCACAAGTT CGGTACCTTC CTGGGCGGCG CCTTCAACTT TATCGACCAG AATATCTTCG GCGGCAAGTT ACCCATTACC CTGCGTGACA ACAAAGCGGA TTACGCCCAA ATGGGGCTGG CGAGTGATTA CCCCAAAATC GACTATCCCA AGGCCGACGG TAAGCTGAGT TTCGACAAAC TCTCGTCTGT CTATTTGTCC AACACCTTCC ATGAGGAAGA TCAGCCCTGC CATCTGCGCC TCAAGGATGC CACCATTCCG CTGGCGGTAA ACCTGCCAAG GTTTGATGAG CCGGCTCAGC GTTACTGCCC TGCCGGTGTG TATGAAGTGG TCGAAGAAGC GGGTGAAAAG AAGTTCGTTA TCAACGGCCA GAACTGCATC CACTGCAAGA CCTGTGATAT CAAGGACCCC AGCCAGAACA TTACCTGGGT AACGCCAGAA GGCGCCGGTG GCCCCAACTA TCCCAACATG TAA
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Protein sequence | MEREFMEFDV VIVGAGPAGL ATACRLMQIS RDAEKELTVC VVEKGSEVGA HILSGAVFEP NVLDELFPDW RETGAPLNTA VTHDEIHLLK SPQDGKLMPN AMVPKTMHNE GNYIISVGNL VRWLGGRAEE LGVEIFPGFA ASELLFNDDG SVKGILIGDM GIGANGEPKD SFMPGMELHA KYTVFAEGCR GHLGKQLIEK FHLDNGKTPQ HYGLGFKELW KVPEGKHTPG LVVHTGGWPL TESKSSGGGF LYHMEDNQVV VGLIIDLNYQ NPHLSPFDEF QRYKTHPVIA QYLEGGERIS YGARAITKGG LNSLPKMSFP GGLLIGCDAG TLNFAKIKGT HTAMKSGIVA AETLAEALFV GVEGGKDLDC FQERFEQSWL GDELHRSRNF GPAMHKFGTF LGGAFNFIDQ NIFGGKLPIT LRDNKADYAQ MGLASDYPKI DYPKADGKLS FDKLSSVYLS NTFHEEDQPC HLRLKDATIP LAVNLPRFDE PAQRYCPAGV YEVVEEAGEK KFVINGQNCI HCKTCDIKDP SQNITWVTPE GAGGPNYPNM
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