Gene Sama_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3511 
SymbolenvZ 
ID4605758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4145737 
End bp4147053 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content55% 
IMG OID639782932 
Productosmolarity sensor protein 
Protein accessionYP_929383 
Protein GI119776643 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.407552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC GCTGGTGGCA GCGCTTGCTG CCCCGCAGCG CCTTCAGTCA AACCGTGATG 
CTGATAGGCT GTTTGCTGTT GATTAATCAG CTGTTTTCCT ATGTGTCTGT GGCGCTTTAC
GTCATCAAAC CCAGCTATCA GCAAATCAAC CAGCTCATTG CCCGGCAAAT CAATTTTTTG
TTTACCGAAG AGGCGGTCAT TGGCCGCGAA TATCTGAGTT TGGTGGATGC CCTCAATGCC
AAGGTCGGCG ATGGCAGCAT GCACGTTTTC AACCAAAAGC AGGCCAGGGA AGCCGGCATA
GACAGCGCCA CCTATTACGG TTTGCTGTCG AATCAGATGT CAGAATACCT CGGCGGCAGC
GCCGAAGTAC GCATCACCCA GGGCGAAACA GTGCAGATTT GGATCCGCCC GCCACAGGCG
CCCAGTGTTT GGATACGGGT ACCTCTGTCG AGTTTCAACG AACTGGAAAT GTCGCTGCTG
ACCCTGTATC TGATGGTGAT TGGTGCGCTC AGTGTCGCCG GCGGCTGGCT GTTTGCCCGC
CGCCAGAGCA AACCCCTTAA GGCGCTGCAG AAGGCCGCCA TCAATGTATC GCGGGGGGAA
TACCCCGAAG CCATTCCCCC TGCCGGCTCC AGTGAAATAG TGGAAGTGAC CCACGCCTTT
AACCAGATGG CCCACAGCAT GCGAATGTTG GAACAGGACC GGGCGTTGAT GATGGCGGGG
ATCTCCCACG ATCTGCGCAC ACCCCTTACC CGAATTCGTC TGGCCTCTGA AATGATGGTG
GATGAGGATG CCTACCTCAG AGACGGCATC ATCGCCGACA TCGATGACAT GAACGCCATC
ATCAATCAGT TCATCGCCTA CATACGCCAG GATCAGGAAG CTGTTTGGGA GAAGGCCGAC
ATCAATCAGC TGGTGAGCGA ATATGCCCAG GCCGAGTCCA AACGTGATGG GGTAATTGAA
CTGGCACTCG GCCCCTGTAT AGGGATCCCG GTGCAGGTTA TCGCCATCAA ACGGGTGCTG
GGTAATCTGG TAGAAAACGC CTTTCGCTAT GGTCGGGGCT GGATACGCAT TTCAACCCGG
ATGGAGAAGT CCTCTTTGGT GCTAACCGTG GAAGATAACG GCCCCGGCAT TCCGGTTGAT
CAAATCCCCA AACTCTTTCA ACCCTTTACC CAGGGCGACA TGGCGCGGGG CAGCCTTGGC
TCCGGTCTGG GGCTGGCCAT TATCAAGCGC ATTGTCGACC GCCATCAGGG CAAGGTGAAA
CTCAGTAACC GGGTTGAAGG TGGTCTGAAA GCCGAGGTAT TTTTACCGCT GGAATAA
 
Protein sequence
MKLRWWQRLL PRSAFSQTVM LIGCLLLINQ LFSYVSVALY VIKPSYQQIN QLIARQINFL 
FTEEAVIGRE YLSLVDALNA KVGDGSMHVF NQKQAREAGI DSATYYGLLS NQMSEYLGGS
AEVRITQGET VQIWIRPPQA PSVWIRVPLS SFNELEMSLL TLYLMVIGAL SVAGGWLFAR
RQSKPLKALQ KAAINVSRGE YPEAIPPAGS SEIVEVTHAF NQMAHSMRML EQDRALMMAG
ISHDLRTPLT RIRLASEMMV DEDAYLRDGI IADIDDMNAI INQFIAYIRQ DQEAVWEKAD
INQLVSEYAQ AESKRDGVIE LALGPCIGIP VQVIAIKRVL GNLVENAFRY GRGWIRISTR
MEKSSLVLTV EDNGPGIPVD QIPKLFQPFT QGDMARGSLG SGLGLAIIKR IVDRHQGKVK
LSNRVEGGLK AEVFLPLE