Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3509 |
Symbol | |
ID | 4605756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4144296 |
End bp | 4144793 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639782930 |
Product | GreA/GreB family elongation factor |
Protein accession | YP_929381 |
Protein GI | 119776641 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAAA AAGCCCATCT CATTACCCGC AAGGGCTGGG AAGCTCTGGA CAAAGAGCTC AAGTACCTGT GGAAAGAATA CCGTCCCGAA ATCACCCTCA AGGTGCAGGA AGCTGCGGCC CAGGGCGATC GTTCCGAGAA CGCCGATTAT ACCTACAACA AGCGCCTGCT CAGGCAAATA GACAGCCGGG TGCGCTATCT CATCAAACGT CTTGAAGTAC TTAAAATCGT TGATTATTCC CCCCAGCAGG AAGGCAAGGT CTTCTTTGGC GCTTGGGTGG AGCTGGAAAA CGATGAAGGG GCTGTTGTGC GTTACCGGAT TGTTGGTAAG GATGAAATAG ACACCAAAAA AGGCTATATC ACCATAGATT CACCCATGGC CCGGGCCCTT ATCGGCAAAC AGGTGGATGA TGAGGTGGTG GTGCAAACCC CGTCGGGACG AAAAGAATGG TTTATCAACG AGATTCGCTA TCAACCCTTT GATGGCATGG AAGCTTAG
|
Protein sequence | MTEKAHLITR KGWEALDKEL KYLWKEYRPE ITLKVQEAAA QGDRSENADY TYNKRLLRQI DSRVRYLIKR LEVLKIVDYS PQQEGKVFFG AWVELENDEG AVVRYRIVGK DEIDTKKGYI TIDSPMARAL IGKQVDDEVV VQTPSGRKEW FINEIRYQPF DGMEA
|
| |