Gene Sama_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3509 
Symbol 
ID4605756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4144296 
End bp4144793 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID639782930 
ProductGreA/GreB family elongation factor 
Protein accessionYP_929381 
Protein GI119776641 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA AAGCCCATCT CATTACCCGC AAGGGCTGGG AAGCTCTGGA CAAAGAGCTC 
AAGTACCTGT GGAAAGAATA CCGTCCCGAA ATCACCCTCA AGGTGCAGGA AGCTGCGGCC
CAGGGCGATC GTTCCGAGAA CGCCGATTAT ACCTACAACA AGCGCCTGCT CAGGCAAATA
GACAGCCGGG TGCGCTATCT CATCAAACGT CTTGAAGTAC TTAAAATCGT TGATTATTCC
CCCCAGCAGG AAGGCAAGGT CTTCTTTGGC GCTTGGGTGG AGCTGGAAAA CGATGAAGGG
GCTGTTGTGC GTTACCGGAT TGTTGGTAAG GATGAAATAG ACACCAAAAA AGGCTATATC
ACCATAGATT CACCCATGGC CCGGGCCCTT ATCGGCAAAC AGGTGGATGA TGAGGTGGTG
GTGCAAACCC CGTCGGGACG AAAAGAATGG TTTATCAACG AGATTCGCTA TCAACCCTTT
GATGGCATGG AAGCTTAG
 
Protein sequence
MTEKAHLITR KGWEALDKEL KYLWKEYRPE ITLKVQEAAA QGDRSENADY TYNKRLLRQI 
DSRVRYLIKR LEVLKIVDYS PQQEGKVFFG AWVELENDEG AVVRYRIVGK DEIDTKKGYI
TIDSPMARAL IGKQVDDEVV VQTPSGRKEW FINEIRYQPF DGMEA