| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3508 |
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| Symbol | |
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| ID | 4605755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4141835 |
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| End bp | 4144171 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782929 |
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| Product | hypothetical protein |
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| Protein accession | YP_929380 |
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| Protein GI | 119776640 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.631069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA ATATTGCGCG GATCATTGCC GATGAACTGA ATGTCCGTGA GGCGCAGGTC
ACTGCCACCA TCGCCCTGCT GGATGACGGT GCCACGGTTC CCTTTGTGGC CCGCTATCGT
AAAGAAGTGA CAGGGGGGCT GGATGACACC CAACTGCGTA CTCTGCACAG CCGTCTTGGT
TATTTGCGTG AGCTGAATGA CCGCAGGGAC GTGATCCTCT CCTCCATCGA CGCTCAGGGC
AAACTGACTC CCGAACTCAA GGCCGCTATT CTGGGTGCTG ACAGCAAGAC CCGTCTTGAA
GATCTCTATT TGCCCTATAA ACCCAAGCGC CGCACCAAGG GACAGATTGC CATCGAAGCC
GGAATCGAAC CGCTGGCGAA CCTCTTGCTG CAGCAGCGGC CTGCAAACCC CGAGGCCGAA
GCCGCTGCCT TTATCAATAC CGAGGCCGGT TTTGCCGATA CCCGTGCCGT GCTAGACGGT
GCCCGTTACA TTCTGATGGA ACGCTTTGCC GAAGATGCCG AGCTGATCCG CAAGGTGCGT
GAACACCTGT CTGGAGTGGC CGTGCTGCAA AGCAAGGTGA TTGAAGGCAA AGAAAAAGAA
GGGGCTAAGT TTCGCGATTA CTTTGAACAC AGCGAGCTGC TGGCCAAAGT TCCTTCCCAC
AGGGCGCTGG CCATGTTGCG TGGCCGCAAT GAGGGCATTC TCAGCCTGAG CATGGTTGCC
GACCCGGACT CAGAACCCGG CAGCGGCAGT TATTGTGAGG TCATTATCGC CAACCATCTG
GGCTTGACCC TGGGCGACAG TGAGGCCGAT AAGTGGCTCA AGACAGTGGT TACCGGTACC
TGGCGTATCA AGGTGGCGCT GCAGATGGAA ACCGAGTTTA TTTCCCGTTT GCGTGAACAG
GCCGAGGACG ACGCCATCAA GGTCTTTGCC CGTAATCTGC ACGATCTGCT GATGGCGGCG
CCAGCCGGTT CCAAGGCGAC CATGGGGCTG GACCCGGGGC TGAGAACCGG CGTGAAGGTG
GCCGTGGTGA ACGACACAGG CAAACTGGTG GCTCACAGCA CCATTTTCCC TCACGAGCCA
CAAAATCAAT GGGATAAGTC GCTGAGAACC CTGGCTAACC TGGTGAGTAT GCACAAGGTG
GAGCTGATTG CCGTGGGCAA TGGCACCGCC TCCCGCGAAA CCGACAAGCT GGCGGCTGAA
TTGATTGCGG CGGTCAAAGA ACATCACCCA ACGCTCACCA AGGTCATGGT AAGTGAGGCG
GGCGCATCTG TTTATTCGGC GTCTGAGCTG GCGGCCAATG AATTTCCGGA TTTGGATGTG
TCCATCCGCG GCGCCGTGTC CATCGCCCGT CGCTTGCAGG ACCCGCTGGC GGAGTTGGTC
AAGATTGAGC CCAAGTCCAT TGGCGTGGGT CAGTATCAAC ACGATGTGAG CCAGAGCCAA
CTGTCCCAGT CGCTGGAAGC CGTGGTTGAA GACTGCGTAA ACAGTGTGGG TGTGGACGTT
AACATGGCGT CTGTTCCCCT GCTCAGCCAG GTGTCTGGCC TCAACAAGAC GCTGGCCAAA
AATCTGGTGG ACTACCGCGA CGAGCACGGC CAGTTCAAGA GCCGAAAAGA GCTGCTCAAG
GTGCCTCGAC TCGGGCCCAA AGCCTTTGAG CAGGCCGCCG GCTTTTTGCG TATCCGCGAG
GGTGATAACC CCCTCGATGC GTCGGCAGTG CACCCCGAAG CCTATTCACT GGTGGAAACC
ATCGCTCAAA CCCGTGAAGT GCCGCTGGCT AATCTCATCG GCAATACCGA GCTTATCCGT
ACCTTGAAGG CAGGGGATTT TGTCACAGAC GCCTTTGGTT TACCCACGGT GACGGATATT
CTCAAGGAAT TGGACAAACC CGGTCGCGAC CCCCGAGGCG AGTTTAAAAC GGCGCACTTT
AAAGAGGGCG TGACTGAAGT TCGTGACCTG AAGCCGGAGA TGATCCTCGA AGGCGTGGTG
ACCAACGTGA CCAATTTCGG TGCCTTTGTG GATGTGGGCG TGCATCAGGA CGGTCTGGTA
CACATATCTT CCTTGTCGGA CAAGTTTGTC AGCGACCCCC ATACCGTGGT GAAGGCCGGT
GATGTGGTGA AGGTGAAAGT GATGGAAGTG GACGTCGAGC GTAAGCGTAT CGGCCTGTCG
ATGCGGCTCG ATGAAAAACC TCAGCCAGCT CAGGCCGCTA AGGGCAAGGG GGCGCCTGCC
GCCAGAACAG CCCAGGCCAA GGGTGGCAAG CCCCAGTCCA AACCCCAGAA GCCTCAGGCT
ATCAATGCGG CCATGGGCAA TGCGTTTGCA GATGCTTTCG CCAAAATGAA GAAATAA
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| Protein sequence | MTSNIARIIA DELNVREAQV TATIALLDDG ATVPFVARYR KEVTGGLDDT QLRTLHSRLG
YLRELNDRRD VILSSIDAQG KLTPELKAAI LGADSKTRLE DLYLPYKPKR RTKGQIAIEA
GIEPLANLLL QQRPANPEAE AAAFINTEAG FADTRAVLDG ARYILMERFA EDAELIRKVR
EHLSGVAVLQ SKVIEGKEKE GAKFRDYFEH SELLAKVPSH RALAMLRGRN EGILSLSMVA
DPDSEPGSGS YCEVIIANHL GLTLGDSEAD KWLKTVVTGT WRIKVALQME TEFISRLREQ
AEDDAIKVFA RNLHDLLMAA PAGSKATMGL DPGLRTGVKV AVVNDTGKLV AHSTIFPHEP
QNQWDKSLRT LANLVSMHKV ELIAVGNGTA SRETDKLAAE LIAAVKEHHP TLTKVMVSEA
GASVYSASEL AANEFPDLDV SIRGAVSIAR RLQDPLAELV KIEPKSIGVG QYQHDVSQSQ
LSQSLEAVVE DCVNSVGVDV NMASVPLLSQ VSGLNKTLAK NLVDYRDEHG QFKSRKELLK
VPRLGPKAFE QAAGFLRIRE GDNPLDASAV HPEAYSLVET IAQTREVPLA NLIGNTELIR
TLKAGDFVTD AFGLPTVTDI LKELDKPGRD PRGEFKTAHF KEGVTEVRDL KPEMILEGVV
TNVTNFGAFV DVGVHQDGLV HISSLSDKFV SDPHTVVKAG DVVKVKVMEV DVERKRIGLS
MRLDEKPQPA QAAKGKGAPA ARTAQAKGGK PQSKPQKPQA INAAMGNAFA DAFAKMKK
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