| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3502 |
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| Symbol | |
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| ID | 4605749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4134324 |
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| End bp | 4134902 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782923 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_929374 |
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| Protein GI | 119776634 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.840353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTACCA TTTCCGAAGC GGCTCAGGCC CACTTTGTGA AGTTGCTGGC CGATCAACCA
GAAGGTACCA ACATCCGCGT ATTTGTGATT AGTCCTGGTA CTGCCCAAGC GGAGTGTGGT
GTGTCCTACT GCCCGCCAGA TGCCGTGGAA GATGATGATA TTGAACTGGA GTTCAACGGT
TTCAATGCCA TGGTTGATGA GAAAAGCGCT CCTTTCCTGG AAGATGCCAG CATAGATTTG
GTCACTGATC AGCTTGGCTC ACAGCTCACG CTCAAGGCGC CCAATGCCAA AATGCGCAAG
GTGTCGGCTG ATGCGTCTCT GGTCGAGCGT ATCGAATACG TCATTCAGGC TGAAATCAAC
CCGCAGCTGG CGAGCCACGG CGGTAACATT CTGCTGGTGG AAGTGACTGA TGATGGTGTG
GCCGTTATCC AGTTCGGTGG TGGTTGTAAC GGTTGCTCCA TGGTGGATGT CACTCTGAAG
GATGGTATCG AGAAACAGCT GCTGGATATG TTCCCGGGTG AGCTGACCGA AGTGCGCGAT
GCCACTGAGC ACCAACACGG TAGTCACTCT TACCAGTGA
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| Protein sequence | MITISEAAQA HFVKLLADQP EGTNIRVFVI SPGTAQAECG VSYCPPDAVE DDDIELEFNG
FNAMVDEKSA PFLEDASIDL VTDQLGSQLT LKAPNAKMRK VSADASLVER IEYVIQAEIN
PQLASHGGNI LLVEVTDDGV AVIQFGGGCN GCSMVDVTLK DGIEKQLLDM FPGELTEVRD
ATEHQHGSHS YQ
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