| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3501 |
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| Symbol | |
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| ID | 4605748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4132918 |
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| End bp | 4134231 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782922 |
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| Product | DNA-damage-inducible protein F |
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| Protein accession | YP_929373 |
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| Protein GI | 119776633 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCATTGA CCTGGTCAGC CCATCAACGT CTGTGGGCCC TGGCGCTACC CATGATGCTG
TCCAATATCA CAGTGCCGCT GCTCGGGCTG GTGGATACCG CCATCATGGG TCACCTGAGT
GAGGCCTATT ATTTGGGCGC GGTTGCACTG GGGTCAACAG TGTTCACGCT AATCGTCTGG
TTGCTGGGGT TTCTGCGGAT GGCCACCACA GGCCTGACCG CCCAAGCCTG GGGGGCAAGC
CAGGGGGAAA CCCAGAAGCG AATTCTTATG CAAGGGCTAA CTCTGGCGCT GGGCGCAGGG
CTATTGGTAT TGCTGGTGCA GCCTGTTTTG CTTAATACGC TGCTGGGCTG GTCAGATGCC
AGCGCAGAAG TACGTCAATA CTGCCGGGAC TACTTTGCCA TTCGTATCTG GTCATTGCCG
CTGGCGCTGG CCAATCTGGT CATGCTTGGC TGGCTTCTGG GCCGCCAACA ACCCAAGGTA
GCCATGTGGC AGCTGATCCT GGCCAACCTG GTCAATATCG CACTGGATGT CCTGTTTGTG
TTTGGCTTTG GCTGGGGGGT TGCAGGTGCC GCATTGGCGT CCGTCATCGC TGATCTGTGC
GCCTTTTCCA TCGCGGCTTT TTTTACCGCC AAGGCCTGGC GAACGCTTGC CTGCCCATCC
CCCGTACTGC GTGACATTAT GGCGAATCTC GGCCAACTGT TCAGACTGAA CCGGGATATC
TTTATTCGCA GCCTTTGTCT GCAAGCCACC TTTGCCTTTA TGACTTTCAA GGGCGCTGGC
CTGGGAGACA CTACAGTGGC CGCCAACGCA GTACTGCTTA ACTTTTTAAT GCTGACATCC
TACGCACTGG ATGGGATTGC CTACTATGCC GAGGCCGAAA CCGGCGCCGC CGTGGGGCGT
CGCGACCCGG CTGCACTCGA TAGTACTGTG GCATTGGCCT TTGCATGGTC GGCGGTTTTT
GCCTGCCTGT TCAGCGGTGG GTTTGCCCTG TGGGGAGAAT GGCTGAGTAC TTTGATGACC
GACATTAGTG CAGTTCAGCA GCTCGCCAAT GAGTTTTTGC CCTGGCTGAT TGCCATGCCA
TTACTGGCGT TCGGCTCCTA CCTGTTCGAT GGTGTATATA TCGGCGCCAC TCAGGGAAGA
GTGATGAGAA ACAGCATGCT GCTCTCAACC GTCGGGGTAT TTTTTCCACT CTGGTGGGGA
TTTTCCGATT GGGGGAACCA TGCACTTTGG CTCGCCATGG GCGGCTTTAT GTTGTGCCGC
AGCCTGAGTC TGGGCTGGCA CTTTGTGCGC TATCGTCACG GCTTTGTTGC CTGA
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| Protein sequence | MPLTWSAHQR LWALALPMML SNITVPLLGL VDTAIMGHLS EAYYLGAVAL GSTVFTLIVW
LLGFLRMATT GLTAQAWGAS QGETQKRILM QGLTLALGAG LLVLLVQPVL LNTLLGWSDA
SAEVRQYCRD YFAIRIWSLP LALANLVMLG WLLGRQQPKV AMWQLILANL VNIALDVLFV
FGFGWGVAGA ALASVIADLC AFSIAAFFTA KAWRTLACPS PVLRDIMANL GQLFRLNRDI
FIRSLCLQAT FAFMTFKGAG LGDTTVAANA VLLNFLMLTS YALDGIAYYA EAETGAAVGR
RDPAALDSTV ALAFAWSAVF ACLFSGGFAL WGEWLSTLMT DISAVQQLAN EFLPWLIAMP
LLAFGSYLFD GVYIGATQGR VMRNSMLLST VGVFFPLWWG FSDWGNHALW LAMGGFMLCR
SLSLGWHFVR YRHGFVA
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