| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3500 |
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| Symbol | |
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| ID | 4605747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4131834 |
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| End bp | 4132883 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782921 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_929372 |
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| Protein GI | 119776632 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAG TGTTGCTGTT TGTATGTGCT TGGTTCTCGG GCCTGGCTCA GGCGGCTGTG
GTGCTGCAGT ATCACCATGT GTCTGAGACC TCGCCCCGGG TCACCAGCGT CACGCCTGCC
GAGTTTCGCA GCCATATGGA CTTTTTGGCA AAAAATGGCT TTAAGGTGGT GCCTCTGACT
GATCTGGTTG CTCAAATCAA GCGGGGTGAA AAACCGCCCC TGAGAGCGGT CGCCATCAGT
TTTGATGATG GTTATCAAAA CATTGCTGAC AATGCCGTTC CTATCTTAAA GGAATATGGA
TTTCCCTACA CATTGTTTGT CTCTATCGCG CCCATGGTGG AGGGGCATAA GGGGATGATG
AGTGAAGCGA CTCTGAAACA GTTGGCTTCT GAAGGCGCCG AAATAGCCAA TCACAGCTAC
GATCACGGCC ATCTGGTACG GCGCTTGGAA GGGGAGGATG AATCCGCCTG GCTATTGCGG
ATAAAGACTC AACTTTTGCA AACCGAAGCC GCACTGATCC GTATTCGTGG TGAAACGACA
CAACCTATGT TGGCCTATCC CTTCGGCGAA TATAACGCTG CGCTGCAGTC TTTGGCCTCG
GAGCTTGGGA TGGTGGCATT CGGCCAACAA TCCGGTGCGC TTGGGCGGTA CAGCGCCTTA
ACCGCCTTGC CGAGGTTTCC TGTGGGTGGG CGTTACGCGA GCCTGGAGAC CCTGAAAGAA
AAACTGTACA GCTTGCCCAT GCCGGTGGCG ACCATATCGC CCGCAGATCC CCTGTTATTG
CAGGACTGGC AACCGCGCAT GAAAGTCACT CTCGCAGAGG TGGCCGATAT CAATAAAGCC
GGGATGCGAT GCTTTTTGCC CAATCAGGAG GCGGTATCAC CACGTTGGCT GGATGATGTC
AGTTTTGAGG TGCAGGCGGA CAAACCTCTG CCGCCGGGGC GTTCGCGCTA TAACTGCACC
GCACCATCCA AAACACAAAA GGGATTTTAC TGGTTTTCCC AGGCCTGGCT CAGGCCCAAC
AAAGATGGCA GCTGGCCAAA AGAGCCCTAA
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| Protein sequence | MHKVLLFVCA WFSGLAQAAV VLQYHHVSET SPRVTSVTPA EFRSHMDFLA KNGFKVVPLT
DLVAQIKRGE KPPLRAVAIS FDDGYQNIAD NAVPILKEYG FPYTLFVSIA PMVEGHKGMM
SEATLKQLAS EGAEIANHSY DHGHLVRRLE GEDESAWLLR IKTQLLQTEA ALIRIRGETT
QPMLAYPFGE YNAALQSLAS ELGMVAFGQQ SGALGRYSAL TALPRFPVGG RYASLETLKE
KLYSLPMPVA TISPADPLLL QDWQPRMKVT LAEVADINKA GMRCFLPNQE AVSPRWLDDV
SFEVQADKPL PPGRSRYNCT APSKTQKGFY WFSQAWLRPN KDGSWPKEP
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