| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3495 |
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| Symbol | |
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| ID | 4605742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4124645 |
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| End bp | 4126732 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782916 |
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| Product | putative CheA signal transduction histidine kinase |
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| Protein accession | YP_929367 |
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| Protein GI | 119776627 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.647593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATAG ATCTTAGCCA ATTCAGTCAG GTGTTCTTCG AGGAAAGTAT CGAGGGCCTG
GCGATTATGG AGTCTGAGCT GCTGAAGCTG GACGTGGCGG CGCCGGACCC AGAAACCATT
AACACCATTT TCAGAGCAGC ACACTCCATC AAAGGCGGCA GTGCCACATT CGGTTTTATG
CAGGTGGCCA ACTACACCCA TCTGCTTGAA ACTCTGCTTG ACGAAATCCG CGATGGTCGT
CGGCAGATGC AGCCTGACCA TGTTGACATG CTGCTGCTTT CGGTGGATTT ACTCAGGGGC
ATGTTCGAAG CCCTGATGAG CCAAGCCGAA TTCAACGACC CCAAGTTACC CGAGCTTGAG
TTGCGGCTGA ATAACACCCT GGCCAATCAA CCAAGCCAAA CGCAATCGAT TTCTCCCCCT
CAGGCAACAA TGGCCTCAGA CTCAAAAACG CTGTGCTGGC AGATTGATTT CAAGGCTGGC
GCAGACATTA TGCGCTGCGG CAACGATCCC ATGTTGATGT TTGCTGAGCT GGCCTCCAAG
GGCACACTGA CGGCCGAGCT CCTGCCGGTT TCCTTTCCCG CATGGGACGA CTTTGACCCC
GAAGCCTGCT ACCTGCACTG GCGCTTAAGA TTGATCACAG ACGAGCCACT GGAAAAACTC
AAAGAGGTGT TCGAGTGGGT CGAAGATGAA TGCGAAATCA GTTACCAACA AACAGCAGCA
GCCCCTTCTG CTGATACCTC CACAGAGATG CTGTCGCCAT CACCACAATC CGAAGTCGAC
CCGCCTGTAG CAGCCCCTGA TGTCATTGCG CTGACGCCCC AGGTTCAGGC TCTTGCCACA
GACAAAGCCG TAGCCAGCCA AAAACAAAGC GCTGCAGCCG CCAAGAGTGG AGAAAGCAGC
TCCATCAGGG TCAGCACAGA AAAAATCGAT ATGCTCATCA ATATGGTGGG TGAGCTGGTG
ATAACCCAAG CCATGCTGGG CCAAATAGGT CAACAGGATG AAATCAATCA GGAGTCGCTG
TTACTGCTGC AACAGGGACT AGAGCAGCTG GCTTCCCATA CCCGGGATTT GCAGGAAAGT
GTCATGCAGA TTCGCATGCT GCCCATCAGC TTTGCGTTTA ACCGCTTCCC CCGCTTGGTC
AGAGACATTG GCCAGCAGCT GGGTAAGAAA GTAGAACTCA TCCTCAAGGG TGAAGACACT
GAGCTGGATA AAACCGTCCT TGAAAAAATT GTCGACCCCA TGGTGCATCT GGTGCGCAAT
TCGCTCGACC ATGGGCTGGA ATCACCCGAA GCCAGATTGG CACAGGGTAA GTCTGAAACC
GGCACCATCA TGCTCAATGC CTATCATCAG GGCGGCTGCA TCATCATAGA AATAGCGGAC
GATGGCGCCG GGCTGAACAC CCACAAGATC CTTGAAAAAG CCCGTCAAAA AGGGCTGGTC
GGCGCCGAGG AAGAGTTATC GGAAGAAGCC ATCCACCAGC TGATATTCAG ACCTGGCTTT
TCCACCGCCG ATGCAGTGTC AGACCTCTCA GGGCGTGGCG TGGGCATGGA TGTGGTCAAG
CGCAATATTC ACGAGCTCAA TGGCTCCATT GAATTGAAAT CCGAGGCGGG TAAAGGCAGC
CGTTTCACCA TTCGACTTCC CCTGACGCTG GCCATACTCG ACGGCCAGCT TATCCGCATC
GGCAAGCACA TATACGTGGT GCCACTGGTG TCCATCTACG AATCGTTGCA GGTGCCCACC
AACCGTATCA ATCGGCTGTC CGATGGCCAT GAGCTGATCC GTCTGCGGGA TGAATATTTA
CCGGTAATCA AGATGTATCG AGAGTTCAAC CACGATGCTG ACGCGCGGGA AATCAAAGAT
GGCCTGGTGA TGGTAGTGGA TCATAACAAT GAAAAGGCCG GCCTGCTGGT GGACGAACTT
CTCGCGCAAC AACAGGTTGT AATCAAAAGC CTGGAGGAGA ACTACACCCG TATTCCGGGC
ATTTCGGGCG CCACCATACT GGGCGACGGC ACAGTCGCAC TCATCATAGA CGTTGCCGGA
CTGGTCAAGT TGGCCGGTAT AGGCAGCAGC AATGAACACG CCGCGTAA
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| Protein sequence | MDIDLSQFSQ VFFEESIEGL AIMESELLKL DVAAPDPETI NTIFRAAHSI KGGSATFGFM
QVANYTHLLE TLLDEIRDGR RQMQPDHVDM LLLSVDLLRG MFEALMSQAE FNDPKLPELE
LRLNNTLANQ PSQTQSISPP QATMASDSKT LCWQIDFKAG ADIMRCGNDP MLMFAELASK
GTLTAELLPV SFPAWDDFDP EACYLHWRLR LITDEPLEKL KEVFEWVEDE CEISYQQTAA
APSADTSTEM LSPSPQSEVD PPVAAPDVIA LTPQVQALAT DKAVASQKQS AAAAKSGESS
SIRVSTEKID MLINMVGELV ITQAMLGQIG QQDEINQESL LLLQQGLEQL ASHTRDLQES
VMQIRMLPIS FAFNRFPRLV RDIGQQLGKK VELILKGEDT ELDKTVLEKI VDPMVHLVRN
SLDHGLESPE ARLAQGKSET GTIMLNAYHQ GGCIIIEIAD DGAGLNTHKI LEKARQKGLV
GAEEELSEEA IHQLIFRPGF STADAVSDLS GRGVGMDVVK RNIHELNGSI ELKSEAGKGS
RFTIRLPLTL AILDGQLIRI GKHIYVVPLV SIYESLQVPT NRINRLSDGH ELIRLRDEYL
PVIKMYREFN HDADAREIKD GLVMVVDHNN EKAGLLVDEL LAQQQVVIKS LEENYTRIPG
ISGATILGDG TVALIIDVAG LVKLAGIGSS NEHAA
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