| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3483 |
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| Symbol | |
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| ID | 4605730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4115112 |
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| End bp | 4116674 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782904 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_929355 |
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| Protein GI | 119776615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.243767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAAT GGTTGTATTG TTTCGCGGCG GCTTTATTGG CCCCGCCCAT CTTTGCGGCT
GACATGCCGC TCAACATGAC ACAAGGTGTT ACTGAGATAA GTGGCAAGGT CTATGGCCTG
CACATGACTA TCCTGTACAT CTGCTGTGCC ATAGGTGTAG TGGTTTTTGG CGCCATGATT
TACGCCATGA TAAACCACCG CAAATCAAAA GGGGCGGTTG CCGCCCAATT TCACGAAAGC
ACCAAGGTGG AAATCGCCTG GACTCTGGTG CCCTTTCTCA TCCTGATTGC CATGGCTATT
CCGGCAACCA AGACCCTTAT CGCCATGGAA GATCCGTCCA ATGCCGACTT GACCATCAAG
ATCACCGGCT CCCAATGGAA GTGGCACTAC GATTACTTTG ACCACGACTT CGGTTTCTAC
AGCATCCTGG CTACACCCAG AAGCCAAATC GAAGGTGCAG AAGCAAAAGG CGATCACTAC
TTGTTGGAAG TGGATAAGCA TCTGGTGCTG CCCACCAACC GCAAGGTGCG CTTTTTGATG
ACCTCCGACG ACGTCATTCA CTCCTGGTGG GTGCCCGCGT TTGCCGTTAA AAAGGATGCC
AATCCGGGCT TTATCAACGA AGCATGGACC CGAATAGATA AACCTGGGAT TTATCACGGC
CAGTGTGCCG AGCTGTGCGG CAAAGACCAC GGCTTTATGC CAATCGTGGT TGAGGTTTTG
CCCGAAGCAG AGTTTGACAC ATGGGTTGAA AACCAGAAGC AACTGGCAAG CAACGCCGCT
GCCGAAGCCG CTGCGGCATT GAACCAAACC CTTTCCATGG AAGAACTGAT GGTGCAGGGT
GAAAAGGTGT ACATGGCCAG CTGCGCCGCC TGTCACCAAC CCAATGGTAT GGGCCTGCCC
GGCGTATTCC CCGCTCTCAA GGGCAGTGCT ATTGCCATGG GTCCGGTAGA CAAGCATCTC
GACATAGTGA TCAACGGTAA ATCCGGTACA GCCATGCAGG CGTTTAACAA GCAGTTATCT
GCCACAGAGA TTGCCGCTGT TGTGACCTAT GAGCGTAATG CATGGGGCAA CAATACCGGT
GATACGGTGC AGGCATCTGA TGTCAACGGC CATGGCAGTG ACAGCACTCC CACCGCGCAA
ACCGGGATGC AAGAAACTGA TCAGGCGCCC CCCGCCAGCG CAGCCGAGAC ATCGACCGAA
GCTCCCCCTG CTGCCGAATC CACTGCCGAC GAGCCTTCAG CCGATGAGCC CATGTCGATG
GATGCTTTGA TGGCCCGTGG TGAGCAAGTG TACATGGCCT CTTGCGCGGC CTGTCACCAA
GCCAATGGTG CCGGTTTGCC CGGTGCGTTT CCCGCCATCA AGGGAAGCCC TATCGCTACA
GGCCCCATCG CCAATCACCT CGACATAGTT ATTCACGGCA AAGCCGGAAC GGCTATGCAG
GCCTTTGGCT CAATGTTGTC TGCCAGGGAC ATTGCTGCGG TGGTGACCTA TGAACGTAAC
GCCTGGGATA ACAACACCGG CGATAGCGTT CAGGCCACCG ACGTAAACAA TCATGGAAAG
TAG
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| Protein sequence | MKQWLYCFAA ALLAPPIFAA DMPLNMTQGV TEISGKVYGL HMTILYICCA IGVVVFGAMI
YAMINHRKSK GAVAAQFHES TKVEIAWTLV PFLILIAMAI PATKTLIAME DPSNADLTIK
ITGSQWKWHY DYFDHDFGFY SILATPRSQI EGAEAKGDHY LLEVDKHLVL PTNRKVRFLM
TSDDVIHSWW VPAFAVKKDA NPGFINEAWT RIDKPGIYHG QCAELCGKDH GFMPIVVEVL
PEAEFDTWVE NQKQLASNAA AEAAAALNQT LSMEELMVQG EKVYMASCAA CHQPNGMGLP
GVFPALKGSA IAMGPVDKHL DIVINGKSGT AMQAFNKQLS ATEIAAVVTY ERNAWGNNTG
DTVQASDVNG HGSDSTPTAQ TGMQETDQAP PASAAETSTE APPAAESTAD EPSADEPMSM
DALMARGEQV YMASCAACHQ ANGAGLPGAF PAIKGSPIAT GPIANHLDIV IHGKAGTAMQ
AFGSMLSARD IAAVVTYERN AWDNNTGDSV QATDVNNHGK
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