| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3481 |
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| Symbol | |
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| ID | 4605728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4113597 |
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| End bp | 4114220 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782902 |
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| Product | LexA repressor |
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| Protein accession | YP_929353 |
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| Protein GI | 119776613 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.216025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACCGC TCACGCCTCG CCAGGCCGAG ATCCTGGACC TAATCAAACG CAACATCGCC
GAAACCGGCA TGCCCCCAAC GCGGGCAGAA ATTGCATCCA GACTCGGCTT TAAAAGTGCT
AATGCCGCCG AGGAGCATCT TAAAGCGCTC GCCAAAAAGG GCTGCATTGA GATTATGCCC
GGCACCTCGC GAGGTATCAG GCTGGCGGGT GATGAGTTGG AAGATCAGCC AGACCCGGGT
TTGCCCTTGA TAGGTCAGGT GGCTGCCGGT GAACCCATTC TCGCCCAAGA GCATGTTGAG
CAGTATTATC AGGTCGATCC TGCCATGTTC CGCCCCCATG CCGATTTTCT GCTGCGGGTT
CGCGGCGACA GTATGAAAGA CATAGGTATT CTCGACGGCG ACCTGCTGGC GGTGCACAAG
ATGAACCAGG CCCGTAATGG CCAGGTGGTG GTTGCCAGGG TGGAAGACGA TGTCACGGTA
AAACGCTTCG AGAAGCAAGG CAATGTGGTG TACCTACACG CAGAGAACGA GGCATTCGCT
CCTATCAGAG TGGATCTTGC CAACCAGAGT CTCACCATCG AGGGCTTGGC TGTGGGCGTT
ATCCGTAATG GAGACTGGCT ATGA
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| Protein sequence | MRPLTPRQAE ILDLIKRNIA ETGMPPTRAE IASRLGFKSA NAAEEHLKAL AKKGCIEIMP
GTSRGIRLAG DELEDQPDPG LPLIGQVAAG EPILAQEHVE QYYQVDPAMF RPHADFLLRV
RGDSMKDIGI LDGDLLAVHK MNQARNGQVV VARVEDDVTV KRFEKQGNVV YLHAENEAFA
PIRVDLANQS LTIEGLAVGV IRNGDWL
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