Gene Sama_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3477 
Symbol 
ID4605724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4108295 
End bp4109071 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID639782897 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_929349 
Protein GI119776609 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.567455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTAA TCGAATATGC ACCGGGTCAG CCTTGCTGGA GTGAGCTGGC CACCCATGAC 
TGGCAGGGTG CCAAGGACTT TTATCATAAG TTGTTTGGTT GGGAGATGGC TGATATGGCC
ATGCCCGGCA GTGCTTTCTC GATGTTTACT CTCGATGGGG ACGACCTCGG AGCCATCTAT
CAGGTGCCTT CTGCATTGGC TGGCAGCGTA AAGACCCAAT GGGGAATTTA CTTCGCGACA
GAAGATGTGA ATGCGGCCAT TGAACGGGTT AAAGCGGCGG GGGGAGAGCT TATTATGGGG
CCCCATGAGG TGGGTCATGC CGGTTGGATG GCGCAGTTGG CTGACCCCGA AGGAGCCCGC
TTTGCCGTGT GGCAGAGCAA AAGGCACATT GGAGCCAAGC GCCGCGGCGA ACCCGGAGCC
CTGTGTTGGG TAGAACTTGC CTGTCGGAGC CCCTCACGGG CTCAGGGATT TTACAGTCAG
GTTTTTGGCT GGGACTGCCG GGAATCCGCA AACGAAGACA TGCCTTACCG GGAATGGTTG
GTTGCTGACG AGGCCCTTGG CGGCATGTTG GAGATGACGG CAGAGTGGGG CGAAATGCCC
GCACACTGGA TGTTGTATTT CCAGGTGGTG GACTGCGATG TTTTTGCCAG GAGGGCGCAA
GAATTGGGGG GCACTCTGTG TGTACCCCCT ACCAATATTC CCGGGGTGGG GCGCTTCGCT
GTGCTCAACG ACCCGGATGG CGGTGTGTTT TCTGTCATTG CCATCCACGG TGGCTGA
 
Protein sequence
MRVIEYAPGQ PCWSELATHD WQGAKDFYHK LFGWEMADMA MPGSAFSMFT LDGDDLGAIY 
QVPSALAGSV KTQWGIYFAT EDVNAAIERV KAAGGELIMG PHEVGHAGWM AQLADPEGAR
FAVWQSKRHI GAKRRGEPGA LCWVELACRS PSRAQGFYSQ VFGWDCRESA NEDMPYREWL
VADEALGGML EMTAEWGEMP AHWMLYFQVV DCDVFARRAQ ELGGTLCVPP TNIPGVGRFA
VLNDPDGGVF SVIAIHGG