| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3474 |
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| Symbol | |
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| ID | 4605721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4102477 |
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| End bp | 4104057 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782894 |
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| Product | heavy metal efflux system protein, putative |
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| Protein accession | YP_929346 |
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| Protein GI | 119776606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.692441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA AAAAGCAAAA AAGTGCCCTG CTGCTGATGG GTGCCAGTCT GGCATTCGGT
CCCGGCATGC CTGCCATGGT ATTGGCTGAA AGCCCACAGC AGTCTCCCGC ATCGGAGGCC
GCAGCAGCCG CCGTTTATCA CTGCCCCATG CATCCCGAGG TAGAAAGCCA CGAGCCGGGG
CGCTGTCCCA AGTGCAAGAT GTTTCTGGTA CCCGGTGCAG GCATCTCTGG CCAGTCCAGC
GAGCCCTTGG CTGAGGCGCA CAAGACCTAT ATTTGCCCCA TGCATCCCGA AGTGGAAAGT
CATGAACCCG GCCGTTGTCC CAAGTGCAAC ATGTTCCTCG TTGAAAAAGA AGAGGAAGAA
GAGGCTGACC CTCAGCCAGA GCATAAGTCG ACGGAAGATC ACAGCGCCCA TCTGGCCGCA
CAAAACGATA TTTTCGCCAC CCCTGCAGCC AGTCCAATCG ACGGTGGCAA GGTCAAATAT
GTGTGCCCCA TGCACGCCCA TATCATCAGC GATGAGCCCG GCACCTGCCC CATCTGCGGT
ATGGACCTCG AGAAGGTAGA ACTCGGCGGG GGCCAGGAGG TTCTGGTCGA CGTATCCGGT
GGCATGCAGC AGGCACTGGC GCTCAGGGTT GCCAAAGCCG AACGCCAAAC CCTGTGGAAA
TTTGTCGATA CCGTTGGCCA AATCGAATAC GACGAGCGCC AAATCCACCA TGTGCACGCC
CGCCTGAACG GTTGGATTGA AACCCTCAAG GTCAATGCCG TTGGTGACAA AGTCAGTAAA
GGGCAATTGC TGTACGAAAT CTATTCGCCG GATCTGGTTA ACGCTCAGGA TGACTATCTG
CTTGCACTGG ATACCGTTAA AAAATCCGGT GATTCAGGTC GTTACAAAGA GTTGCTGCGA
AAAGCCAGTC TGCGACTTGA ACTGCTCGGC ATGAATGAGG CGCAAATCAA AGAGCTTGCC
AAAACCCAAA CGACCCAATA TCGGGTGCCC TTCTACGCCC GCCAGGATGG GGTGATCACC
ACCCTGAATA CCCGTGAAGG CATGTACATT CAACCCATGA GCGAAGTGCT CGCCCTGACA
GACATCAGCA AGGTATGGGT CATAGCCGAC GTATTCGAAA ATGAGCAGAG CTGGCTCAAA
GTAGGTCAGC CCGCCGAAGT GGCGGTACCT GCCATGGGGC TCAGCGGCAT CAAAGGCACC
ATAGATTATA TTTATCCCGA GCTGGACCCT GTCACCCGCA GCCTGCGGGT ACGGGTAGTG
CTGGACAACC CAAACCAACA GCTGCGCCCC AATACGCTCG CCAAGGTCAA ACTTTATGGC
GGGCCCGAGC GAGACGTTCT GACCATTCCC CAGGAAGCGT TGATTCAAAC GGGTAAGGAA
AACAGGGTGA TAGTTCGCAC CGCAGATAAC AGCTTTGCCG CCCGCCAGGT CACTGTCGGC
ATGTATTCCC AGGGCAAGGT TGAGGTGCTG TCTGGTCTGA GTGACGGTGA AGAAGTCGTG
ACATCCGGGC AGTTTTTGCT GGACTCCGAA GCCAGTCTCA AGGGCAGCCT GATGCGCCTT
GGCAGCGGCC ATCAGCACTA A
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| Protein sequence | MNTKKQKSAL LLMGASLAFG PGMPAMVLAE SPQQSPASEA AAAAVYHCPM HPEVESHEPG
RCPKCKMFLV PGAGISGQSS EPLAEAHKTY ICPMHPEVES HEPGRCPKCN MFLVEKEEEE
EADPQPEHKS TEDHSAHLAA QNDIFATPAA SPIDGGKVKY VCPMHAHIIS DEPGTCPICG
MDLEKVELGG GQEVLVDVSG GMQQALALRV AKAERQTLWK FVDTVGQIEY DERQIHHVHA
RLNGWIETLK VNAVGDKVSK GQLLYEIYSP DLVNAQDDYL LALDTVKKSG DSGRYKELLR
KASLRLELLG MNEAQIKELA KTQTTQYRVP FYARQDGVIT TLNTREGMYI QPMSEVLALT
DISKVWVIAD VFENEQSWLK VGQPAEVAVP AMGLSGIKGT IDYIYPELDP VTRSLRVRVV
LDNPNQQLRP NTLAKVKLYG GPERDVLTIP QEALIQTGKE NRVIVRTADN SFAARQVTVG
MYSQGKVEVL SGLSDGEEVV TSGQFLLDSE ASLKGSLMRL GSGHQH
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