| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3468 |
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| Symbol | |
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| ID | 4605715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4097738 |
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| End bp | 4099429 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782888 |
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| Product | cell division protein FtsY |
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| Protein accession | YP_929340 |
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| Protein GI | 119776600 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00185267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG AAGCCTTAGC TTCGAAAACG GCCCAGTGCC AACACAGACC GGTACCACAG
ATGTCAAAGA AAGGTTTTTT CTCCTGGTTC CGCCGGGACA AGGATGATGC GGCCGCAAAA
CAGGCCGAAG CAGAACACGC GATTGTCGAA CAGGTTCAGG CAGAAAGCGC TGCGGCCGAA
CAAGCGGAGC GTGAAGCCGC TGAACAGGCG GCAGCTGAAG TTACACGTTT AGAAGCTGAG
CAGCTGGAAG CCGAGCGCAT CGCCGCCGAA CAAGCCGAGC AGGAACGTAT TGCTGCCGAG
CAGGCCGCAG CCGAAGCTGC CCGCTTGGAA GCTGAGCGCC AGGAAGAAGC TCGTCTTGCA
GCTGAGCAGC TGGAAGCAGA GCGCATCGCC GCCGAACAAG CCGAGCAGGA ACGCATTGCT
GCCGAGCAGG CCGCAGCCGA AGCTGCCCGC TTGGAAGCTG AGCGCCAGAA AGAAGCTCGT
CTTGCAGCAG AGCAGCTGGA AGCCGAGCGC ATCGCCGCCG AACAAGCCGA GCAGGAACGC
ATTGCTGCCG AGCAGGCCGC AGCCGAAGCT GCCCGCTTGG AAGCTGAGCG CCAGGAAGAA
GCTCGTCTTG CAGCAGAGCA GCTGGAAGCC GAGCGCATTG CCGCCGAACA GGCAGAGCAG
GAACGCATTG CTGCTGAGCA GAGCGCTGCT GAAGCCGCAT CGGTGCAAAC TGAACAGGCA
GAAGAAGTTC AGCCAGAGCC TCAGGCCAAG CCGGTGAAAG AGGGCTTTTT TGCTCGTCTG
AAGCGTGGCC TGATGCGCAC CAGCGAGAAT ATTGGCAGTG GCTTTATCGG CCTGTTCCGC
GGCAAGAAAA TTGATGATGA GCTGTTTGAA GAGCTGGAAG AGCAGCTGCT GATTGCCGAC
GTGGGTGTAG AAACCACCTC AAAGCTGATC AAGAGCCTGA CCGAGCATGC CAGCCGCAGA
CAGCTGAAAG ATGCCGAGGC TTTATACGAA CTGCTGCGTG AAGAAATGCA GCGCACTCTG
GAGCCGGTCA GCGTGCCTCT GGTGCCGGAA AATGCGCAGG GTCCTTATGT GATCCTGATG
GTGGGTGTAA ACGGTGTGGG TAAAACCACC ACCATTGGCA AGCTTGCCAA GCAGTACCAG
AGTCAGGGCA AGAGCGTGAT GCTGGCTGCA GGTGATACCT TCCGCGCCGC TGCCGTTGAG
CAGCTGCAGG TGTGGGGGCA GCGCAACAAT ATTCCCGTGG TTGCCCAGCA TACCGGTGCC
GACAGTGCCT CTGTGCTGTT TGACGCATTG CAATCGGCCA AGGCCAAGGG TGTGGATGTG
TTGATTTGCG ACACCGCCGG TCGTCTGCAG AACAAAAACC ATCTGATGGA AGAGCTGAAA
AAAGTTGTGA GGGTAATGAA GAAGCTCGAC GAGAGCGCGC CCCACGAAGT GATGCTGACG
CTGGATGCCA GCACGGGCCA GAATGCCATC AGCCAGGCCA AGCTGTTCCA GGAAGCCGTC
GGTGTAACCG GTATCTCCAT TACCAAGCTC GATGGTACCG CCAAAGGCGG GGTGATCTTT
GCCATTGCCG ATAAATTTGG TATTCCTATC CGTTACATAG GTGTTGGCGA ACAGATAGAC
GATCTGCGAG TATTTAACGC CCGCGACTTT ATCGATGCCC TGTTCAGTCA GGAGAAAACG
GATAACACAT GA
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| Protein sequence | MTDEALASKT AQCQHRPVPQ MSKKGFFSWF RRDKDDAAAK QAEAEHAIVE QVQAESAAAE
QAEREAAEQA AAEVTRLEAE QLEAERIAAE QAEQERIAAE QAAAEAARLE AERQEEARLA
AEQLEAERIA AEQAEQERIA AEQAAAEAAR LEAERQKEAR LAAEQLEAER IAAEQAEQER
IAAEQAAAEA ARLEAERQEE ARLAAEQLEA ERIAAEQAEQ ERIAAEQSAA EAASVQTEQA
EEVQPEPQAK PVKEGFFARL KRGLMRTSEN IGSGFIGLFR GKKIDDELFE ELEEQLLIAD
VGVETTSKLI KSLTEHASRR QLKDAEALYE LLREEMQRTL EPVSVPLVPE NAQGPYVILM
VGVNGVGKTT TIGKLAKQYQ SQGKSVMLAA GDTFRAAAVE QLQVWGQRNN IPVVAQHTGA
DSASVLFDAL QSAKAKGVDV LICDTAGRLQ NKNHLMEELK KVVRVMKKLD ESAPHEVMLT
LDASTGQNAI SQAKLFQEAV GVTGISITKL DGTAKGGVIF AIADKFGIPI RYIGVGEQID
DLRVFNARDF IDALFSQEKT DNT
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