| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3463 |
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| Symbol | |
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| ID | 4605710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4092847 |
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| End bp | 4094280 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782883 |
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| Product | O-succinylbenzoic acid--CoA ligase |
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| Protein accession | YP_929335 |
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| Protein GI | 119776595 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCTC AGCGTTCAGT CAGGCCTCAA CTATCCATCT CGCCCCTGCA GCAAGCATCG
GCCACCTGGC CCGACGCCCA TGCACTGATA ACGCCGGAAT TCACCTTGTC TTTCGAGGTG
CTGGGCAAGC TGGTGCGTGA GGTTGCCAGA CAGCTTAAGA CACAAGATAT ACAGCGCCTC
GGGGTGATTG GGCCCAACAG TGTTGAGCAA ATTGTCCTCT ACTGGGCCTG CGCCGAAGCA
GGTGCCCTTT TTTGCCCCCT GTCATGGCGC TTTCCGGTTT CTCAGCTGGA GATTCTGATA
CGGCGTTTTG CCCTCGATGC ACTGCATGCC CCGACGCTTG AAAGCCTTTG CCCTGCGTTA
CCCCGTATTC ATGTTGCCGA CATGATTGGC GGAATAGGGG CAAGCTCCCT GACGACTCCG
GCCAGCGCAG TATTGGACCT GTCGCAGCCG GTTAATCTGG TGCTGAGTTC AGGCTCCACG
GGCGAGCCTA AAGCCGCAGT ACATGCTCTG GCCAATCATA TTGCCAGCGC TGAGGGTGCC
CGATGCCTTA TCCCGCTGTC ACCGGGCGAT CGCTGGCTCC TGTCATTGCC GCTGTTTCAT
ATCGGCGGTA TCGCCATTCT CAATCGATGT GCCCTCGCCG GGGCTGCGGT GGTGTTGCCA
CAGCAGCAAG CATCGACAAG ACCACTGTCG ATGGCGCAGG CCATGTCAGC ACTGTCACCC
ACCCATGTCT CTTTGGTGGC GGCGCAGCTC ACTGCGCTGC TTGAGGATTC GCCTGACTCA
CTTAGCTCAG TTAAGGCGTT GCTGCTGGGG GGCAGCGCCA TAGGTGGCGC GTTGCTTTCA
CGACTTGAAG CACTGGGGAT ACACGCTTTT ACCAGCTACG GCATGACAGA AATGAGCTCG
CAAATCACCA CAGGCCCCGC CAATAGCGAG GGCGCAAGCG GCACCCTGTT GCCGGGACGG
GAGCTCAGAA TCCATCAGGG GGAAATTCAG GTACGAGGCG AGACTCTGTT CCTTGGGTAT
CTGGAGGATA ACGGTCTGAG ATTACCGCTC ACCGATGACG GTTGGTTTGC GACCAAAGAC
TGCGGCCATC TGGACGAAGC CGGCAGACTT TTTGTGGCGG GGCGGCTCGA CAACATGTTT
ATCTGCGGCG GAGAAAACCT GCACCCGGAA GAAATTGAAG CGGCGCTGTG CCAACATCCT
CTGGTGCTGG AGGCCATCGT TTATCCCAAA GCTGATAACA CTTTTGGATT CTTGCCCCAT
GCGCTGCTGC GCTGCCGCAA TACCATGCCC TCCCAAGGGG AATTGGATGA CTTCCTTGCA
AGCCGTATCG CCCGCTTTAA ACGGCCTCGC AGTTATCAGG CATGGCCACA GATGGCAAGC
AGCGGCCTGA AAACCAACCG CAAGGCGGTG GTGGCCGCAG TGCTGCGCCA GTGA
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| Protein sequence | MSPQRSVRPQ LSISPLQQAS ATWPDAHALI TPEFTLSFEV LGKLVREVAR QLKTQDIQRL
GVIGPNSVEQ IVLYWACAEA GALFCPLSWR FPVSQLEILI RRFALDALHA PTLESLCPAL
PRIHVADMIG GIGASSLTTP ASAVLDLSQP VNLVLSSGST GEPKAAVHAL ANHIASAEGA
RCLIPLSPGD RWLLSLPLFH IGGIAILNRC ALAGAAVVLP QQQASTRPLS MAQAMSALSP
THVSLVAAQL TALLEDSPDS LSSVKALLLG GSAIGGALLS RLEALGIHAF TSYGMTEMSS
QITTGPANSE GASGTLLPGR ELRIHQGEIQ VRGETLFLGY LEDNGLRLPL TDDGWFATKD
CGHLDEAGRL FVAGRLDNMF ICGGENLHPE EIEAALCQHP LVLEAIVYPK ADNTFGFLPH
ALLRCRNTMP SQGELDDFLA SRIARFKRPR SYQAWPQMAS SGLKTNRKAV VAAVLRQ
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